HHsearch alignment for GI: 254780533 and conserved domain: PRK07937
>PRK07937 lipid-transfer protein; Provisional.
Probab=99.74 E-value=3.2e-18 Score=135.40 Aligned_cols=243 Identities=18% Similarity=0.095 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCCCCC
Q ss_conf 99999976322100268100268653110244556860000001234554321001210000132101022333332110
Q gi|254780533|r 82 LYGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRNQLR 161 (423)
Q Consensus 82 ~l~l~aa~~Al~dAGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~ 161 (423)
T Consensus 26 eL~~eA~~~Al~DAGl~~~D-Id----~~~~g~~--d--~~~--------G--~~~~----------~~--~~~~~lg~~ 74 (352)
T PRK07937 26 EMLMPCFAQLYEELGITKAD-IG----FWCSGSS--D--YLA--------G--RAFS----------FI--SAIDSIGAV 74 (352)
T ss_pred HHHHHHHHHHHHHCCCCHHH-CC----EEEEECC--C--CCC--------C--CCHH----------HH--HHHHHCCCC
T ss_conf 99999999999984999899-97----8967146--5--345--------4--1013----------57--777643687
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHH------------HHH----------HHHHHHHCCCCCCC
Q ss_conf 00113334444322344332331335602100121011223------------222----------23433210124566
Q gi|254780533|r 162 GPNHAVTTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPI------------CRL----------GVASFAACRALSTR 219 (423)
Q Consensus 162 Gp~~ti~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~------------~~~----------~~~~f~~~~~ls~~ 219 (423)
T Consensus 75 -p~~~~~~~~~sg~~Al~~A~~aI~sG~~d~vLvvG~ek~s~g~~~~~~~~~~dp~~~~~~~~~~~~~~al~ar~~m-~~ 152 (352)
T PRK07937 75 -PPINESHVEMDAAWALYEAYIKILTGEVDTALVYGFGKSSAGTLRRVLARQLDPYTVAPLWPDSVSMAGLQARLGL-DA 152 (352)
T ss_pred -CCEEEECEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHH-HH
T ss_conf -7453301022299999999999867899989998733668775333333457811313344627899999999999-85
Q ss_pred CC------------------CCHHHHHHHHH--------------CCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 66------------------68422002220--------------34676533244045410234544433223333211
Q gi|254780533|r 220 FN------------------DDPTRASRPFD--------------QDRDGFVMGEGAGALVLEDLEHAKARGAKIYSEII 267 (423)
Q Consensus 220 ~~------------------~~p~~~~rpFd--------------~~~dG~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~ 267 (423)
T Consensus 153 ~g~t~E~lA~Vavkn~~nA~~NP~A~-~~~tvedvl~s~~ia~PL~~~dc~p~sDGAaAvVl~s~e~Ar~l~~~p-v~I~ 230 (352)
T PRK07937 153 GKWTEEQMAEVAADSFADARRNDSAQ-PSISVDELLARPYFADPLRRHDIAPITDGAAAIVLAAGDRARELRERP-AWIT 230 (352)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCC-CCCCHHHHHCCCEECCCCCHHHHCCCCCEEEEEEEECHHHHHHCCCCC-EEEE
T ss_conf 49999999999999988772198766-789999982688355788566508878726999995599997566897-8999
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCC---CCCHH
Q ss_conf 001211112210001211001332101333232223333102103676544320135677642002434111---37012
Q gi|254780533|r 268 GYGLSGDAFHITMPPEDGNGAYRCMSSAIARAKLLPSDIDYINAHGTSTIADTIELGAVERLMGDSCYHVSM---SSTKS 344 (423)
Q Consensus 268 G~~~~~d~~~~~~~~~~~~~~~~~i~~aL~~a~i~~~di~~i~~hgtgt~~D~~E~~al~~~f~~~~~~~~v---~s~K~ 344 (423)
T Consensus 231 g~~~~~~~~~~~~~--dl~~~~~~~~aa~~aagi~p~DiDvaElhD~Fs~~el~~~E~LG--l~---g~~pVN~sGG~ls 303 (352)
T PRK07937 231 GIEHRIETPALGAR--DLTVSPSTAAAAEAATGGDTGDIDVAELHAPFTHQELILAEAIG--LP---DKTKVNPSGGALA 303 (352)
T ss_pred EEEEECCCCCCCCC--CCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCC--CC---CCCCCCCCCCCCC
T ss_conf 98984368877766--55237999999999749995347578872575077899988428--89---9954668986210
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 212236899999999999998708
Q gi|254780533|r 345 AMGHLLGAAGAVEAAICNLAIRDG 368 (423)
Q Consensus 345 ~~Gh~~~asG~~~l~~~~l~l~~~ 368 (423)
T Consensus 304 --ghp~gAtGl~~~~E~~~ql~~~ 325 (352)
T PRK07937 304 --ANPMFAAGLERIGFAARHIWDG 325 (352)
T ss_pred --CCCCCHHHHHHHHHHHHHHHCC
T ss_conf --6986428999999999998555