HHsearch alignment for GI: 254780533 and conserved domain: PRK08256
>PRK08256 lipid-transfer protein; Provisional.
Probab=99.84 E-value=6.7e-21 Score=152.54 Aligned_cols=281 Identities=22% Similarity=0.225 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCCCC
Q ss_conf 99999997632210026810026865311024455686000000123455432100121000013210102233333211
Q gi|254780533|r 81 ILYGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRNQL 160 (423)
Q Consensus 81 ~~l~l~aa~~Al~dAGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l 160 (423)
T Consensus 23 ~~L~~eA~~~AL~dAGi~~~~-ID----~v~~G~~~~~~~~~---~~a--------------------------~~~~g~ 68 (391)
T PRK08256 23 PDMAAEAGRAALADAGIDYDE-VQ----QAYVGYVYGDSTSG---QRA--------------------------LYEVGM 68 (391)
T ss_pred HHHHHHHHHHHHHHCCCCHHH-CC----EEEEEECCCCCCCH---HHH--------------------------HHHCCC
T ss_conf 999999999999982989899-89----99897036875005---999--------------------------996133
Q ss_pred C-CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHHH----------HHHHH--------------------H
Q ss_conf 0-001133344443223443323313356021001210112232----------22234--------------------3
Q gi|254780533|r 161 R-GPNHAVTTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPIC----------RLGVA--------------------S 209 (423)
Q Consensus 161 ~-Gp~~ti~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~~----------~~~~~--------------------~ 209 (423)
T Consensus 69 ~g~P~~tV~~~CaSG~~Ai~~Aa~~I~sG~advvla~G~E~Ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (391)
T PRK08256 69 TGIPVVNVNNNCSTGSTALFLARQAVASGAADCALALGFEQMQPGALGSVWDDRPSPLERHDKALAELVGFDGFPPALRM 148 (391)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 69965888787616999999999999769988899964403576665666587767112245666653044436389999
Q ss_pred HHH-CCCCCCCCCC------------------CHHHH------------HHH-HH--CCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 321-0124566666------------------84220------------022-20--34676533244045410234544
Q gi|254780533|r 210 FAA-CRALSTRFND------------------DPTRA------------SRP-FD--QDRDGFVMGEGAGALVLEDLEHA 255 (423)
Q Consensus 210 f~~-~~~ls~~~~~------------------~p~~~------------~rp-Fd--~~~dG~~~gEGa~~lvLe~~~~A 255 (423)
T Consensus 149 ~a~~a~~~~~~~g~t~e~~A~vav~~~~~a~~np~A~~~~~~t~e~v~~s~~i~~plt~~~~s~~sDGAaAvvl~See~A 228 (391)
T PRK08256 149 FGGAGREHMQKYGTTAETFAKIGAKARRHAANNPYAQFRDEVTLEDVLASPMIWGPLTRLQCCPPTCGAAAAILCSEEFA 228 (391)
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCCEEEEEEECHHHH
T ss_conf 99999999999786999859999997898871961013788889998234852240257645899997189999569999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-C---CCCCCCCC-CHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHH-
Q ss_conf 4332233332110012111122-1---00012110-0133210133323222333310210367654432013567764-
Q gi|254780533|r 256 KARGAKIYSEIIGYGLSGDAFH-I---TMPPEDGN-GAYRCMSSAIARAKLLPSDIDYINAHGTSTIADTIELGAVERL- 329 (423)
Q Consensus 256 ~~rg~~i~a~i~G~~~~~d~~~-~---~~~~~~~~-~~~~~i~~aL~~a~i~~~di~~i~~hgtgt~~D~~E~~al~~~- 329 (423)
T Consensus 229 ~~~g~~~~v~I~g~a~~~~~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGl~~~DiDv~Ei~daFa~---~~l~~le~lG 305 (391)
T PRK08256 229 RKHGLDRAVEIAAQAMTTDFPSTFDGGDMINLVGYDMTRAAAQQVYEQAGVGPEDIDVIELHDCFSA---NELLTYEALG 305 (391)
T ss_pred HHCCCCCCEEEEEEEEECCCCHHCCCCCCHHHCCCCCHHHHHHHHHHHCCCCHHHCCEEEECCCCHH---HHHHHHHHCC
T ss_conf 8649998779999998526720014788144305640699999999984999888767642155548---8999999819
Q ss_pred H----------HC----CCCCCCCCCCHH--HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2----------00----243411137012--2122368999999999999987083277588878874488650788672
Q gi|254780533|r 330 M----------GD----SCYHVSMSSTKS--AMGHLLGAAGAVEAAICNLAIRDGIVPATLNLDNPAKKTFIDLVPHRAI 393 (423)
Q Consensus 330 f----------~~----~~~~~~v~s~K~--~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~ 393 (423)
T Consensus 306 ~~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~GatG~~~~~e~~~QLrG~a--------------------g~rQ 365 (391)
T PRK08256 306 LCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTA--------------------GARQ 365 (391)
T ss_pred CCCCCCHHHHHHCCCCCCCCCEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH--------------------CCCC
T ss_conf 99888268898668855699823818950864688664579999999999971102--------------------0354
Q ss_pred CCCCCEEEEECCCCCCEEEEEEEEE
Q ss_conf 4788789994456777358999982
Q gi|254780533|r 394 KKNVNVAMSNSFGFGGTNVSLVFRK 418 (423)
Q Consensus 394 ~~~~~~al~~s~G~gG~n~~~il~~ 418 (423)
T Consensus 366 V~~a~~aL~~~~G~gg~~~v~i~~r 390 (391)
T PRK08256 366 VEGARLALQHNLGLGGACVVTLYQR 390 (391)
T ss_pred CCCCCEEEECCCCCCCEEEEEEEEC
T ss_conf 7870057660546450079999852