HHsearch alignment for GI: 254780533 and conserved domain: PRK08304
>PRK08304 stage V sporulation protein AD; Validated.
Probab=96.20 E-value=0.0021 Score=40.74 Aligned_cols=175 Identities=21% Similarity=0.213 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCCCC
Q ss_conf 99999997632210026810026865311024455686000000123455432100121000013210102233333211
Q gi|254780533|r 81 ILYGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRNQL 160 (423)
Q Consensus 81 ~~l~l~aa~~Al~dAGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l 160 (423)
T Consensus 57 ~~m~~~A~~~al~Ka~l~~~d------Id~~~aG---D---------Ll-nQ---------------~i~s~f~ar~l~- 101 (336)
T PRK08304 57 SKLMSDAIQQALQKANLKESD------IDYLLAG---D---------LL-NQ---------------TISANFVARELG- 101 (336)
T ss_pred HHHHHHHHHHHHHHCCCCHHH------CEEEEEC---H---------HH-HH---------------HHHHHHHHHHCC-
T ss_conf 999999999999974999778------7389722---2---------45-54---------------677667798659-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 00011333444432234433233133560210012101122322223433210124566666842200222034676533
Q gi|254780533|r 161 RGPNHAVTTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPICRLGVASFAACRALSTRFNDDPTRASRPFDQDRDGFVM 240 (423)
Q Consensus 161 ~Gp~~ti~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rpFd~~~dG~~~ 240 (423)
T Consensus 102 -IPf~GlyGACST~~Esl~laa~~vdgg~A~~vla~tSSH~~tA--ErQFR----~P~E-----yG~Qrp~tAq--wTV- 166 (336)
T PRK08304 102 -IPFLGLYGACSTMMESLALASMLIDGGFADRVLAATSSHFATA--ERQFR----FPTE-----YGGQRPPTAQ--WTV- 166 (336)
T ss_pred -CCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCHHH--HHHCC----CCHH-----CCCCCCCCCC--EEE-
T ss_conf -9801025677889999999999982663645310023342036--65515----8032-----0677998651--788-
Q ss_pred CCCCEEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEE
Q ss_conf 24404541023454443-3223333211001211112210-00121100133210133323222333310210
Q gi|254780533|r 241 GEGAGALVLEDLEHAKA-RGAKIYSEIIGYGLSGDAFHIT-MPPEDGNGAYRCMSSAIARAKLLPSDIDYINA 311 (423)
Q Consensus 241 gEGa~~lvLe~~~~A~~-rg~~i~a~i~G~~~~~d~~~~~-~~~~~~~~~~~~i~~aL~~a~i~~~di~~i~~ 311 (423)
T Consensus 167 -TGaGa~il~~~~~~p~It~~T-iGkVvD~Gi~-D~~nMGaAMAP---AA~dTI~~hf~Dtg~~p~dYDlIvT 233 (336)
T PRK08304 167 -TGAGAVLLSKEGSGPKITYAT-IGKVIDYGIK-DPLDMGAAMAP---AAADTIKQHFEDTGRTPEDYDLIVT 233 (336)
T ss_pred -ECEEEEEEECCCCCCEEEEEE-EEEEEECCCC-CCCCCHHHHHH---HHHHHHHHHHHHHCCCHHHCCEEEE
T ss_conf -751799981389997798986-7888764888-84303555537---8999999999980999002348996