HHsearch alignment for GI: 254780533 and conserved domain: cd00830
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.37 E-value=1.3e-12 Score=99.53 Aligned_cols=291 Identities=22% Similarity=0.285 Sum_probs=161.9
Q ss_pred EEEEEEEEECCCCC-CHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCHHHHHHHCHHHH
Q ss_conf 89994547718898-99999999982986553078875500486661415156545534579576789899985289999
Q gi|254780533|r 4 VVVTGLGMITPLGC-GVDVSWSRLIAGEVGIRHLDQKFDLEGLSSKIAGLIPVGNGSDGTFNYEDWILSSDLRKIDQFIL 82 (423)
Q Consensus 4 VaItG~g~v~p~G~-~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~ag~i~~~~~~~~~f~~~~~i~~~~~~~~d~~~~ 82 (423)
T Consensus 2 ~~I~~~g~y~P~~~v~n~~~~~~~--g~~------~~~----i~~~~G--i~~R~~a----~~~-----------e~~~~ 52 (320)
T cd00830 2 ARILGIGSYLPERVVTNDELEKRL--DTS------DEW----IRTRTG--IRERRIA----DPG-----------ETTSD 52 (320)
T ss_pred CEEEEEEEECCCCEECHHHHHHHH--CCC------HHH----HHHCCC--CEEEEEC----CCC-----------CCHHH
T ss_conf 789999997799378499999886--989------899----987029--7489988----999-----------99999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCCCCC-
Q ss_conf 9999976322100268100268653110244556860000001234554321001210000132101022333332110-
Q gi|254780533|r 83 YGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRNQLR- 161 (423)
Q Consensus 83 l~l~aa~~Al~dAGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~- 161 (423)
T Consensus 53 ma~~Aa~~aL~~ag~~~~d-Id----lli~~s~~~~---------------------~~~P-----~~a~~v~~~LGl~~ 101 (320)
T cd00830 53 LAVEAAKKALEDAGIDADD-ID----LIIVATSTPD---------------------YLFP-----ATACLVQARLGAKN 101 (320)
T ss_pred HHHHHHHHHHHHCCCCCCC-CC----EEEEECCCCC---------------------CCCC-----CHHHHHHHHHCCCC
T ss_conf 9999999999866989567-88----8999415689---------------------8688-----39999999968899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 00113334444322344332331335602100121011223222234332101245666668422002220346765332
Q gi|254780533|r 162 GPNHAVTTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPICRLGVASFAACRALSTRFNDDPTRASRPFDQDRDGFVMG 241 (423)
Q Consensus 162 Gp~~ti~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rpFd~~~dG~~~g 241 (423)
T Consensus 102 ~~~fdi~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~e~~-s~~----------~~-------------~~~~~~~~lfG 157 (320)
T cd00830 102 AAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETL-SRI----------LD-------------WTDRSTAVLFG 157 (320)
T ss_pred CCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHH-CCC----------CC-------------CCCCCHHHCCC
T ss_conf 7225104551158999999999985598761699841342-255----------45-------------46621111037
Q ss_pred CCCEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCC-------------------CCCCCCCC-----CCCCHHHHHHCCC
Q ss_conf 4404541023454443322333321100-121111-------------------22100012-----1100133210133
Q gi|254780533|r 242 EGAGALVLEDLEHAKARGAKIYSEIIGY-GLSGDA-------------------FHITMPPE-----DGNGAYRCMSSAI 296 (423)
Q Consensus 242 EGa~~lvLe~~~~A~~rg~~i~a~i~G~-~~~~d~-------------------~~~~~~~~-----~~~~~~~~i~~aL 296 (423)
T Consensus 158 DgaaA~ll~~~~~~~----~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L 233 (320)
T cd00830 158 DGAGAVVLEATEEDP----GILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEAL 233 (320)
T ss_pred CCCEEEEEEECCCCC----CEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH
T ss_conf 863489996248888----4246899970688652684589766776433356761797328999988765699999999
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 32322233331021036765443201356776420024341113701221223689999999999999870832775888
Q gi|254780533|r 297 ARAKLLPSDIDYINAHGTSTIADTIELGAVERLMGDSCYHVSMSSTKSAMGHLLGAAGAVEAAICNLAIRDGIVPATLNL 376 (423)
Q Consensus 297 ~~a~i~~~di~~i~~hgtgt~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~ 376 (423)
T Consensus 234 ~~~g~~~~did~~v~Hq~~~----~~~~~~~~~lgi~~~k~~~--~~~~~GN~~sasi~~~L~---~~~~~g~l~----- 299 (320)
T cd00830 234 EKAGLTPDDIDWFVPHQANL----RIIEAVAKRLGLPEEKVVV--NLDRYGNTSAASIPLALD---EAIEEGKLK----- 299 (320)
T ss_pred HHCCCCCCCCCEEEEECCCH----HHHHHHHHHHCCCHHHHHH--HHHHCCCHHHHHHHHHHH---HHHHCCCCC-----
T ss_conf 98599910165799706878----9999999980969899675--685107558768999999---999749999-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEE
Q ss_conf 788744886507886724788789994456777358999
Q gi|254780533|r 377 DNPAKKTFIDLVPHRAIKKNVNVAMSNSFGFGGTNVSLV 415 (423)
Q Consensus 377 ~~~~~~~~~~~v~~~~~~~~~~~al~~s~G~gG~n~~~i 415 (423)
T Consensus 300 -------------------~Gd~vll~~~G~G~s~g~~~ 319 (320)
T cd00830 300 -------------------KGDLVLLLGFGAGLTWGAAL 319 (320)
T ss_pred -------------------CCCEEEEEEECHHHHHHHHH
T ss_conf -------------------85999999980453253202