HHsearch alignment for GI: 254780533 and conserved domain: cd00833
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=100.00 E-value=0 Score=694.28 Aligned_cols=397 Identities=30% Similarity=0.475 Sum_probs=355.7
Q ss_pred CCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCEECC-CCCCCCCCCCC----------CCEECCCCCCCCCCCCHHHC-C
Q ss_conf 838999454771889899999999982986553078-87550048666----------14151565455345795767-8
Q gi|254780533|r 2 RRVVVTGLGMITPLGCGVDVSWSRLIAGEVGIRHLD-QKFDLEGLSSK----------IAGLIPVGNGSDGTFNYEDW-I 69 (423)
Q Consensus 2 ~rVaItG~g~v~p~G~~~~~~w~~L~~G~s~i~~~~-~~~~~~~~~~~----------~ag~i~~~~~~~~~f~~~~~-i 69 (423)
T Consensus 1 e~IaItG~g~~~P~g~~~~~fw~~L~~G~~~i~~~p~~r~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~fd~~~f~i 76 (421)
T cd00833 1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGGFLDD----VDAFDAAFFGI 76 (421)
T ss_pred CCEEEEEEEEECCCCCCHHHHHHHHHCCCCEEECCCHHHCCHHHCCCCCCCCCCCCCCCCEECCC----CCCCCHHHCCC
T ss_conf 98999810678989999999999998299877528957758432578643468865430345378----34268866599
Q ss_pred CHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHH
Q ss_conf 98999852899999999976322100268100268653110244556860000001234554321001210000132101
Q gi|254780533|r 70 LSSDLRKIDQFILYGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISL 149 (423)
Q Consensus 70 ~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (423)
T Consensus 77 ~~~ea~~mdp~~rl~L~~a~eAl~dAG~~~~~-~~~~r~GV~iG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 148 (421)
T cd00833 77 SPREAEAMDPQQRLLLEVAWEALEDAGYSPES-LAGSRTGVFVGASSSDY-------LELLARDPDEIDAYAATGTSRAF 148 (421)
T ss_pred CHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHH-CCCCCEEEEECCCCCCH-------HHHHHCCCCCCCCCCCCCCCHHH
T ss_conf 99999871999999999999999752898346-48863499966666647-------88974275657853013543117
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 02233333211000113334444322344332331335602100121011223222234332101245666668422002
Q gi|254780533|r 150 LSGNISIRNQLRGPNHAVTTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPICRLGVASFAACRALSTRFNDDPTRASR 229 (423)
Q Consensus 150 ~a~~is~~~~l~Gp~~ti~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~r 229 (423)
T Consensus 149 ~a~~is~~~~~~Gp~~~v~tACaSsl~Ai~~A~~~i~~G~~d~ai~Gg~~~~~~~~~~~~~~~~~~ls~------~~~~r 222 (421)
T cd00833 149 LANRISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSP------DGRCR 222 (421)
T ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECEEEEECCHHHHHHHHHCCCCCC------CCCCC
T ss_conf 999999996899960033536279999999999998579943544120003158689999863578689------99856
Q ss_pred HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEE
Q ss_conf 22034676533244045410234544433223333211001211112210001211001332101333232223333102
Q gi|254780533|r 230 PFDQDRDGFVMGEGAGALVLEDLEHAKARGAKIYSEIIGYGLSGDAFHITMPPEDGNGAYRCMSSAIARAKLLPSDIDYI 309 (423)
Q Consensus 230 pFd~~~dG~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~~i~~aL~~a~i~~~di~~i 309 (423)
T Consensus 223 pFD~~~~G~v~gEGa~~lvLe~~~~A~~~g~~I~a~i~G~g~~~dg~~~~~~~P~~~~~~~~~~~al~~agi~~~~i~yi 302 (421)
T cd00833 223 PFDADADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYV 302 (421)
T ss_pred CCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 78889998655575135436878999876994799998999806897778888756689999999999729994412089
Q ss_pred EECCCCCC-CCCCHHHHHHHHHHCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 10367654-43201356776420024---341113701221223689999999999999870832775888788744886
Q gi|254780533|r 310 NAHGTSTI-ADTIELGAVERLMGDSC---YHVSMSSTKSAMGHLLGAAGAVEAAICNLAIRDGIVPATLNLDNPAKKTFI 385 (423)
Q Consensus 310 ~~hgtgt~-~D~~E~~al~~~f~~~~---~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~~ 385 (423)
T Consensus 303 eaHgtgT~~gD~~E~~ai~~~f~~~~~~~~~~~v~S~Ks~~GH~~~AaG~~~~i~~~lal~~~~iPpt~n~~~~~p~~~~ 382 (421)
T cd00833 303 EAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDF 382 (421)
T ss_pred EEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 97447686669999999999961257777863023543453433576799999999999855982898998999988984
Q ss_pred C----CCCCCCCCC----CCCEEEEECCCCCCEEEEEEE
Q ss_conf 5----078867247----887899944567773589999
Q gi|254780533|r 386 D----LVPHRAIKK----NVNVAMSNSFGFGGTNVSLVF 416 (423)
Q Consensus 386 ~----~v~~~~~~~----~~~~al~~s~G~gG~n~~~il 416 (423)
T Consensus 383 ~~~~~~v~~~~~~w~~~~~~r~a~vnsfgfGG~Na~lvl 421 (421)
T cd00833 383 EESPLRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred CCCCEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEC
T ss_conf 447635107772488889844999906158874579979