HHsearch alignment for GI: 254780533 and conserved domain: pfam00195
>pfam00195 Chal_sti_synt_N Chalcone and stilbene synthases, N-terminal domain. The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain.
Probab=97.53 E-value=9.1e-05 Score=49.38 Aligned_cols=195 Identities=14% Similarity=0.116 Sum_probs=98.0
Q ss_pred EEEEEEEEECCCCC-CHHHHHHHHH---CCCCC--C-EECCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCH----H
Q ss_conf 89994547718898-9999999998---29865--5-30788755004866614151565455345795767898----9
Q gi|254780533|r 4 VVVTGLGMITPLGC-GVDVSWSRLI---AGEVG--I-RHLDQKFDLEGLSSKIAGLIPVGNGSDGTFNYEDWILS----S 72 (423)
Q Consensus 4 VaItG~g~v~p~G~-~~~~~w~~L~---~G~s~--i-~~~~~~~~~~~~~~~~ag~i~~~~~~~~~f~~~~~i~~----~ 72 (423)
T Consensus 17 A~Il~IgTA~Pp~~~~Q~~~~d~~~~~~~~~~~~~~k~~l~ri~~~sgI~~R~~vl~~e~~~~~P~~--~~~~~ps~~~R 94 (228)
T pfam00195 17 ATILAIGTATPSNCVDQSTYPDYYFRVTKSEHLTDLKEKFQRICEKSTIKKRYMVLTEEILKENPEL--CTEMAPSLDAR 94 (228)
T ss_pred EEEEEEEEECCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCC--CCCCCCCHHHH
T ss_conf 6999999718995524899999999973443242678999989984698831586176876149551--02569998999
Q ss_pred HHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCC
Q ss_conf 99852899999999976322100268100268653110244556860000001234554321001210000132101022
Q gi|254780533|r 73 DLRKIDQFILYGMVASDMALADSGWAPKTDKDRNSTGVVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSG 152 (423)
Q Consensus 73 ~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~~~~~r~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 152 (423)
T Consensus 95 ~~~~~~~a~~La~~Aa~~AL~~aG~~~~d-I----thlv~vt~TG~~~Pg---------------------------~d~ 142 (228)
T pfam00195 95 QDIAVVEVPKLGKEAALKAIKEWGQPKSK-I----THLVFCTTSGVDMPG---------------------------ADY 142 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHH-C----CEEEEECCCCCCCCC---------------------------HHH
T ss_conf 99999999999999999999995889889-9----999999479998874---------------------------789
Q ss_pred CCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 333332110001---13334444322344332331335602100121011223222234332101245666668422002
Q gi|254780533|r 153 NISIRNQLRGPN---HAVTTACSSGAHAIGDASRLIAFGDADVMVAGGAEAPICRLGVASFAACRALSTRFNDDPTRASR 229 (423)
Q Consensus 153 ~is~~~~l~Gp~---~ti~~aCsSsl~Ai~~A~~~i~~G~~d~aivGg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~r 229 (423)
T Consensus 143 ~l~~~LGL~~~v~R~~i~~~GC~gg~~gL~~A~~~~~~~p~~~VLvv~~Elcs--l---~f~~~---~---~~~------ 205 (228)
T pfam00195 143 QLTKLLGLRPSVKRVMLYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITA--V---TFRGP---S---ETH------ 205 (228)
T ss_pred HHHHHCCCCCCCHHEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHH--E---EECCC---C---CCC------
T ss_conf 99998298987211141145416489999999999982999879999824011--0---30488---7---656------
Q ss_pred HHHCCCCCCCCCCCCEEEECC
Q ss_conf 220346765332440454102
Q gi|254780533|r 230 PFDQDRDGFVMGEGAGALVLE 250 (423)
Q Consensus 230 pFd~~~dG~~~gEGa~~lvLe 250 (423)
T Consensus 206 -~~~lV~~aLFgDGAaAvvv~ 225 (228)
T pfam00195 206 -LDSLVGQALFGDGAAAVIIG 225 (228)
T ss_pred -HHHHHHHHHCCCCCEEEEEE
T ss_conf -77773441202751799971