HHsearch alignment for GI: 254780533 and conserved domain: pfam01154
>pfam01154 HMG_CoA_synt_N Hydroxymethylglutaryl-coenzyme A synthase N terminal.
Probab=91.00 E-value=0.083 Score=30.47 Aligned_cols=90 Identities=12% Similarity=0.111 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCEEECCCCHHCCCCCCCCC
Q ss_conf 999999997632210026810026865311-0244556860000001234554321001210000132101022333332
Q gi|254780533|r 80 FILYGMVASDMALADSGWAPKTDKDRNSTG-VVFGSGMGGLNRIVESSNVLRDGGPRKISPFTVPGSIISLLSGNISIRN 158 (423)
Q Consensus 80 ~~~l~l~aa~~Al~dAGl~~~~~~~~~r~g-v~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 158 (423)
T Consensus 50 ~vTmAanAa~~ll~~~~i~~~------~Ig~l~vgTES~-iD~SKs-------------------------~~t~l~~ll 97 (171)
T pfam01154 50 INSLCLTVVQKLMERNNLDYD------CIGRLEVGTETI-IDKSKS-------------------------VKTVLMQLF 97 (171)
T ss_pred HHHHHHHHHHHHHHHCCCCHH------HCCEEEECCCCC-CCCCCC-------------------------HHHHHHHHH
T ss_conf 999999999999987399988------840799637764-566556-------------------------899999983
Q ss_pred CCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCEE--CCEEECHHHH
Q ss_conf 110001----133344443223443323313356021--0012101122
Q gi|254780533|r 159 QLRGPN----HAVTTACSSGAHAIGDASRLIAFGDAD--VMVAGGAEAP 201 (423)
Q Consensus 159 ~l~Gp~----~ti~~aCsSsl~Ai~~A~~~i~~G~~d--~aivGg~d~~ 201 (423)
T Consensus 98 ~~~~~~~~~~~e~k~ACyggTaAL~~a~~~v~s~~~~~k~alVV~sDiA 146 (171)
T pfam01154 98 EESGNTDIEGIDTTNACYGGTAALFNALNWIESSSWDGRYALVVAGDIA 146 (171)
T ss_pred CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
T ss_conf 7657887403330010698999999999999828878963999984100