HHsearch alignment for GI: 254780534 and conserved domain: TIGR02813

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA; InterPro: IPR004432 Members of this entry represent PfaA, which is involved in omega-3 polyunsaturated fatty acid biosynthesis, for example PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is found together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologues of PfaA, also included in this entry, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis; an alternative to the more familiar iterated mechanism of chain extension and desaturation, and like PfaA the more distant homologues are likewise found near genes for homologues of PfaB, PfaC, and/or PfaD..
Probab=97.85  E-value=7.5e-06  Score=53.70  Aligned_cols=70  Identities=19%  Similarity=0.319  Sum_probs=24.7

Q ss_pred             HHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC--CCCCHHHHHCCCCHHHHHHHHH
Q ss_conf             9999999999836999988487867454206571009999999999838--8348889850588999999999
Q gi|254780534|r    9 FEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFS--LEIPEESANKILTVKDAVDFIR   79 (85)
Q Consensus         9 ~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~--i~i~~~~~~~~~Tv~dlv~~I~   79 (85)
T Consensus      1445 ~~~Ml~VVAdK-TGYP~EMLeL~MDMEADLGIDSIKRVEILG~VQd~lP~LPEL~PEDLAE~RTLGEIVsy~~ 1516 (2773)
T TIGR02813      1445 QNVMLEVVADK-TGYPTEMLELEMDMEADLGIDSIKRVEILGTVQDELPDLPELSPEDLAECRTLGEIVSYMQ 1516 (2773)
T ss_pred             HHHHHHHHCCC-CCCCHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             76665421036-8896112114533000158761421344111554077888987235787557889999861