Query gi|254780534|ref|YP_003064947.1| acyl carrier protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 85
No_of_seqs 105 out of 1696
Neff 6.9
Searched_HMMs 33803
Date Wed Jun 1 16:27:42 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780534.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2cnr_A FAS, ACP, acyl carrier 99.6 8.2E-15 2.4E-19 103.5 7.3 81 1-82 1-81 (82)
2 >2qnw_A Acyl carrier protein; 99.5 3E-14 8.8E-19 100.4 9.3 80 2-82 2-81 (82)
3 >2amw_A Hypothetical protein N 99.5 5.4E-15 1.6E-19 104.5 4.8 77 7-83 2-82 (83)
4 >1x3o_A Acyl carrier protein; 99.5 7.6E-14 2.2E-18 98.1 9.4 79 3-82 1-79 (80)
5 >1f80_D Acyl carrier protein; 99.5 1.5E-14 4.3E-19 102.1 5.5 80 2-82 2-81 (81)
6 >3gzm_A Acyl carrier protein; 99.5 9.4E-14 2.8E-18 97.6 9.3 79 4-83 2-80 (81)
7 >1klp_A ACP, ACPM, meromycolat 99.5 8.7E-14 2.6E-18 97.8 8.9 83 1-84 1-83 (115)
8 >2ava_A ACP I, acyl carrier pr 99.5 3E-14 9E-19 100.3 5.8 80 4-84 1-80 (82)
9 >1dv5_A APO-DCP, APO-D-alanyl 99.5 3.2E-14 9.4E-19 100.2 3.5 77 5-82 2-80 (80)
10 >2kci_A Putative acyl carrier 99.4 5.5E-14 1.6E-18 98.9 4.0 62 7-69 2-63 (63)
11 >2dnw_A Acyl carrier protein; 99.4 3.4E-13 1E-17 94.5 7.7 82 2-84 10-91 (99)
12 >3ejb_A Acyl carrier protein; 99.4 3.7E-13 1.1E-17 94.2 6.9 79 3-82 18-96 (97)
13 >2ehs_A ACP, acyl carrier prot 99.4 8E-13 2.4E-17 92.4 8.6 76 8-84 2-77 (77)
14 >1l0i_A Acyl carrier protein; 99.4 9.5E-13 2.8E-17 92.0 7.3 76 6-82 2-77 (78)
15 >1vku_A Acyl carrier protein; 99.4 1.9E-12 5.8E-17 90.2 7.4 80 3-84 13-92 (100)
16 >2afd_A Protein ASL1650; twist 99.3 1.7E-11 4.9E-16 85.0 8.8 78 3-82 10-87 (88)
17 >1nq4_A Oxytetracycline polyke 99.3 6.3E-12 1.9E-16 87.3 6.2 80 2-83 3-82 (95)
18 >3lmo_A Specialized acyl carri 99.2 1.8E-12 5.3E-17 90.4 1.9 78 6-84 2-79 (101)
19 >1af8_A Actinorhodin polyketid 99.2 2.3E-12 6.7E-17 89.8 2.3 81 2-84 4-84 (86)
20 >2jq4_A AGR_C_4658P, hypotheti 99.2 3.2E-11 9.6E-16 83.4 8.0 81 3-84 18-101 (105)
21 >2cgq_A Acyl carrier protein A 99.2 2.5E-11 7.3E-16 84.0 6.4 79 4-84 23-101 (113)
22 >1or5_A Acyl carrier protein; 99.2 2E-11 6E-16 84.5 3.7 79 5-84 2-82 (83)
23 >2ju1_A Erythronolide synthase 99.1 2E-10 6E-15 78.9 7.7 77 5-82 18-94 (95)
24 >1fh1_A NODF, nodulation prote 99.1 3.8E-12 1.1E-16 88.6 -1.7 78 4-83 9-86 (92)
25 >2jgp_A Tyrocidine synthetase 99.0 8.9E-10 2.6E-14 75.3 6.4 77 4-84 7-83 (87)
26 >2cq8_A 10-formyltetrahydrofol 99.0 2.2E-09 6.4E-14 73.2 7.7 79 3-84 21-100 (110)
27 >1dny_A Non-ribosomal peptide 98.9 3E-09 8.8E-14 72.4 6.7 77 4-84 11-87 (91)
28 >2roq_A Enterobactin synthetas 98.9 1E-09 3E-14 75.0 3.4 78 4-85 14-91 (91)
29 >2cg5_B Fatty acid synthase; t 98.8 5.7E-09 1.7E-13 70.8 5.1 78 5-84 4-81 (91)
30 >2vsq_A Surfactin synthetase s 98.8 3.6E-09 1.1E-13 71.9 2.6 73 4-80 14-86 (86)
31 >2uv9_A Fatty acid synthase al 98.5 1.7E-08 5E-13 68.2 0.0 58 4-62 104-161 (166)
32 >2fq1_A Isochorismatase; ENTB, 98.5 1E-07 3E-12 63.8 3.7 74 6-83 3-76 (76)
33 >3ce7_A Specific mitochodrial 96.1 0.0055 1.6E-07 37.3 3.7 34 36-69 14-47 (47)
34 >2vz8_A Fatty acid synthase; t 93.8 0.012 3.6E-07 35.3 0.0 63 16-79 262-326 (642)
35 >2hfk_A Pikromycin, type I pol 66.7 0.21 6.1E-06 28.5 -4.2 65 5-73 7-71 (319)
36 >1rqt_A L8, 50S ribosomal prot 66.6 3.8 0.00011 21.4 2.3 21 40-60 14-34 (37)
37 >2oai_A Hemolysin; PFAM03471, 55.2 8.8 0.00026 19.3 2.5 31 49-79 28-58 (94)
38 >1v32_A AT5G08430, hypothetica 41.3 26 0.00078 16.7 3.1 58 2-59 34-93 (101)
39 >1dd3_A 50S ribosomal protein 37.9 18 0.00053 17.6 1.8 24 39-62 12-35 (57)
40 >1h99_A Transcription antiterm 37.3 33 0.00096 16.2 3.2 23 45-67 80-102 (114)
41 >2bnk_A Early protein GP16.7; 35.2 35 0.001 16.0 3.9 35 49-83 12-51 (67)
42 >2rk5_A Putative hemolysin; st 29.1 33 0.00097 16.1 2.0 27 49-78 18-44 (87)
43 >2pls_A CBS domain protein; AP 29.1 29 0.00087 16.4 1.7 30 49-78 19-49 (86)
44 >1dd4_C 50S ribosomal protein 28.3 46 0.0013 15.3 2.6 23 39-61 12-34 (40)
45 >2p3h_A Uncharacterized CBS do 27.1 33 0.00097 16.1 1.7 27 49-78 22-48 (101)
46 >3lae_A UPF0053 protein HI0107 26.8 33 0.00099 16.1 1.7 27 49-78 19-45 (81)
47 >1v31_A Hypothetical protein R 25.6 21 0.00061 17.3 0.4 59 2-61 26-87 (93)
48 >1h99_A Transcription antiterm 23.5 57 0.0017 14.8 3.2 22 45-66 76-97 (110)
49 >2r2z_A Hemolysin; APC85144, s 22.6 51 0.0015 15.1 2.0 27 49-78 26-52 (93)
50 >2p13_A CBS domain; alpha-beta 22.3 50 0.0015 15.1 1.9 28 49-77 25-52 (90)
51 >3d9w_A Putative acetyltransfe 21.5 40 0.0012 15.7 1.2 26 43-68 97-122 (136)
52 >2pli_A Uncharacterized protei 21.3 49 0.0014 15.2 1.7 27 49-78 28-54 (91)
No 1
>>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} (A:)
Probab=99.56 E-value=8.2e-15 Score=103.52 Aligned_cols=81 Identities=25% Similarity=0.509 Sum_probs=77.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH
Q ss_conf 98785899999999999983699998848786745420657100999999999983883488898505889999999998
Q gi|254780534|r 1 MPNANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRK 80 (85)
Q Consensus 1 M~~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~ 80 (85)
|+++.+++..+|++++++.+ +++++++.++++|.+|||+|||..++++..++++||+++|.+++.++.||+++++||.+
T Consensus 1 ls~~~~~i~~~i~~i~~~~l-~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~i~~~~gi~i~~~~~~~~~Ti~~l~~~i~~ 79 (82)
T 2cnr_A 1 MAATQEEIVAGLAEIVNEIA-GIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILD 79 (82)
T ss_dssp CCCCHHHHHHHHHHHHHHHS-CCCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH-CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH
T ss_conf 98989999999999999996-87600032025699880761889999999999998377899998649999999999988
Q ss_pred HH
Q ss_conf 55
Q gi|254780534|r 81 AK 82 (85)
Q Consensus 81 ~~ 82 (85)
++
T Consensus 80 ~~ 81 (82)
T 2cnr_A 80 HQ 81 (82)
T ss_dssp SB
T ss_pred CC
T ss_conf 61
No 2
>>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics consortium, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.90A {Toxoplasma gondii RH} (A:)
Probab=99.55 E-value=3e-14 Score=100.37 Aligned_cols=80 Identities=50% Similarity=0.762 Sum_probs=76.0
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 87858999999999999836999988487867454206571009999999999838834888985058899999999985
Q gi|254780534|r 2 PNANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKA 81 (85)
Q Consensus 2 ~~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~ 81 (85)
+++.+++..+|++++++.+ ++++..+.++++|.+|||+||+..++++..++++||++||..++.++.|++++++|+.++
T Consensus 2 ~~~~~~i~~~i~~i~~~~l-~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~i~~~~g~~i~~~~~~~~~Ti~~la~~l~~~ 80 (82)
T 2qnw_A 2 SSDDRPLLERVKDVVADQL-GVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKA 80 (82)
T ss_dssp -CCSHHHHHHHHHHHHHHH-CCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHC
T ss_conf 9861699999999999986-544000350577888716649899999999999888999999987189999999999882
Q ss_pred H
Q ss_conf 5
Q gi|254780534|r 82 K 82 (85)
Q Consensus 82 ~ 82 (85)
+
T Consensus 81 ~ 81 (82)
T 2qnw_A 81 K 81 (82)
T ss_dssp T
T ss_pred C
T ss_conf 3
No 3
>>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea} (A:)
Probab=99.54 E-value=5.4e-15 Score=104.54 Aligned_cols=77 Identities=18% Similarity=0.310 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHCC-CCHHHCCCCCCHHH-HCCCCHHHHHHHHHHHHHHHCCCCCHHHH--HCCCCHHHHHHHHHHHH
Q ss_conf 9999999999998369-99988487867454-20657100999999999983883488898--50588999999999855
Q gi|254780534|r 7 DVFEAVKEVILSQLTS-VKEDQIVESARFIE-ELGADSLDVVELVMIFEEKFSLEIPEESA--NKILTVKDAVDFIRKAK 82 (85)
Q Consensus 7 ei~~~v~~ii~~~l~~-~~~~~i~~ds~l~~-dLg~DSLd~vel~~~lE~~f~i~i~~~~~--~~~~Tv~dlv~~I~~~~ 82 (85)
++.++|+++|++.+.. .+++.++++++|.+ +||+|||+.++++..+|++|||+||++++ .++.||+++++||.+++
T Consensus 2 ~i~~~i~~~i~~~l~~~~~~~~i~~d~~l~~~~LGlDSl~~vel~~~iE~~fgi~i~~~~l~~~~~~Tv~~l~~~i~~~~ 81 (83)
T 2amw_A 2 QHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKL 81 (83)
T ss_dssp CTHHHHHHHHHHHTTCGGGGGSCCTTSCSTTTSTTTTHHHHHHHHHHHHHHTTCCCCTTTCCGGGSSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCHHHHHHHHHHHH
T ss_conf 43999999999984889871336887342216779880799999999999949846811123875689999999999985
Q ss_pred H
Q ss_conf 3
Q gi|254780534|r 83 Q 83 (85)
Q Consensus 83 ~ 83 (85)
.
T Consensus 82 ~ 82 (83)
T 2amw_A 82 S 82 (83)
T ss_dssp C
T ss_pred C
T ss_conf 3
No 4
>>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.50A {Thermus thermophilus HB8} (A:)
Probab=99.52 E-value=7.6e-14 Score=98.12 Aligned_cols=79 Identities=51% Similarity=0.784 Sum_probs=75.2
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 78589999999999998369999884878674542065710099999999998388348889850588999999999855
Q gi|254780534|r 3 NANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAK 82 (85)
Q Consensus 3 ~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~ 82 (85)
|+.+++..++++++++.+ ++++.+|.++++|..|||+||+..++++..++++||+++|..++.++.||+++++||.++.
T Consensus 1 l~~~~~~~~l~~~~a~~l-~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~i~~~~g~~i~~~~~~~~~Ti~~la~~i~~~~ 79 (80)
T 1x3o_A 1 MTEQEIFEKVKAVIADKL-QVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAKL 79 (80)
T ss_dssp CCHHHHHHHHHHHHHHHH-TCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH-CCCHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHC
T ss_conf 999999999999999986-8973440511556650577689999999999998889999999972999999999999826
No 5
>>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} (D:)
Probab=99.51 E-value=1.5e-14 Score=102.11 Aligned_cols=80 Identities=46% Similarity=0.732 Sum_probs=75.6
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 87858999999999999836999988487867454206571009999999999838834888985058899999999985
Q gi|254780534|r 2 PNANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKA 81 (85)
Q Consensus 2 ~~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~ 81 (85)
+++.+++..++++++++.+ ++++++|.++++|.+|||+||+..++++..++++||++++..++.+..|++++++|+.++
T Consensus 2 ~~~~~~i~~~l~~i~~~~l-~i~~~~I~~~~~~~~dlG~DSl~~~~l~~~i~~~~gi~i~~~~l~~~~Ti~~la~~i~~~ 80 (81)
T 1f80_D 2 PLGSADTLERVTKIIVDRL-GVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQNQ 80 (81)
T ss_dssp ---CCHHHHHHHHHHHHHS-SCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC--
T ss_pred CCCHHHHHHHHHHHHHHHH-CCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHC
T ss_conf 9968999999999999998-879887475411377538868899999999999988998999986399999999999866
Q ss_pred H
Q ss_conf 5
Q gi|254780534|r 82 K 82 (85)
Q Consensus 82 ~ 82 (85)
|
T Consensus 81 q 81 (81)
T 1f80_D 81 Q 81 (81)
T ss_dssp -
T ss_pred C
T ss_conf 7
No 6
>>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} PDB: 3gzl_A* 2fq0_A* 2fq2_A* (A:)
Probab=99.51 E-value=9.4e-14 Score=97.60 Aligned_cols=79 Identities=47% Similarity=0.749 Sum_probs=75.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 85899999999999983699998848786745420657100999999999983883488898505889999999998553
Q gi|254780534|r 4 ANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQ 83 (85)
Q Consensus 4 t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~ 83 (85)
+..++.+++++++++.+ +++++.+.++++|..|||+|||..++++..++++||+++|..++.++.||+++++||.++.+
T Consensus 2 ~~~~i~~~l~~~i~~~l-~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~i~~~~gi~l~~~~~~~~~ti~~la~~i~~~~~ 80 (81)
T 3gzm_A 2 SLKSTFDDIKKIISKQL-SVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNNK 80 (81)
T ss_dssp CHHHHHHHHHHHHHHHH-TCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHH-CCCHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 70259999999999997-89888736542202432575899999999999997899799998739999999999998647
No 7
>>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis H37RV} (A:)
Probab=99.51 E-value=8.7e-14 Score=97.78 Aligned_cols=83 Identities=27% Similarity=0.546 Sum_probs=78.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH
Q ss_conf 98785899999999999983699998848786745420657100999999999983883488898505889999999998
Q gi|254780534|r 1 MPNANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRK 80 (85)
Q Consensus 1 M~~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~ 80 (85)
.|++++++..+|++++++.+ ++++++|.++++|..|||+||+..++++..++++||+.||..++.++.|+++++.||.+
T Consensus 1 ~~~~~~~~~~~l~~i~a~~l-g~~~~~i~~~~~~~~dlG~DSl~~~~l~~~l~~~~g~~i~~~~l~~~~Ti~~la~~i~~ 79 (115)
T 1klp_A 1 XPVTQEEIIAGIAEIIEEVT-GIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQK 79 (115)
T ss_dssp CCCCHHHHHHHHHHHHHHHT-CCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHH-CCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH
T ss_conf 99899999999999999998-93998879875236663975867999999999998899899999738999999999999
Q ss_pred HHHC
Q ss_conf 5537
Q gi|254780534|r 81 AKQT 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+...
T Consensus 80 ~~~~ 83 (115)
T 1klp_A 80 LEEE 83 (115)
T ss_dssp HHSS
T ss_pred HHCC
T ss_conf 7056
No 8
>>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* (A:)
Probab=99.49 E-value=3e-14 Score=100.34 Aligned_cols=80 Identities=33% Similarity=0.552 Sum_probs=75.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 85899999999999983699998848786745420657100999999999983883488898505889999999998553
Q gi|254780534|r 4 ANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQ 83 (85)
Q Consensus 4 t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~ 83 (85)
|++++.+++++++++.+ +++++++.++++|.+|||+|||..++++..+|++||+++|.+++.++.||+++++||.++..
T Consensus 1 s~~~i~~~l~~~~~~vl-~~~~~~i~~~~~f~~dlG~DSl~~~~l~~~i~~~~gi~i~~~~~~~~~Ti~~l~~~i~~~~~ 79 (82)
T 2ava_A 1 AKKETIDKVSDIVKEKL-ALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLE 79 (82)
T ss_dssp CCHHHHHHHHHHHHHHT-TCSSSSCCCSSCCSCCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH-CCCHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 93899999999999998-85988738730010014654678999999999885478999998739999999999999987
Q ss_pred C
Q ss_conf 7
Q gi|254780534|r 84 T 84 (85)
Q Consensus 84 ~ 84 (85)
.
T Consensus 80 ~ 80 (82)
T 2ava_A 80 K 80 (82)
T ss_dssp H
T ss_pred C
T ss_conf 4
No 9
>>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle; NMR {Lactobacillus casei} (A:)
Probab=99.46 E-value=3.2e-14 Score=100.23 Aligned_cols=77 Identities=13% Similarity=0.221 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH--CCCCHHHHHHHHHHHH
Q ss_conf 58999999999999836999988487867454206571009999999999838834888985--0588999999999855
Q gi|254780534|r 5 NDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESAN--KILTVKDAVDFIRKAK 82 (85)
Q Consensus 5 ~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~--~~~Tv~dlv~~I~~~~ 82 (85)
++++..+|++++++.+ +++++.+.++++|.++||+|||..++++..++++||++||.+++. ++.||+++++||.++|
T Consensus 2 e~~i~~~i~~i~a~~l-~~~~~~i~~~~~~~~~lG~DSl~~~~l~~~i~~~~~i~i~~~~~~~~~~~ti~~la~~i~~~r 80 (80)
T 1dv5_A 2 DEAIKNGVLDILADLT-GSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQAQ 80 (80)
T ss_dssp CHHHHHHHHHHHHHHH-TSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHH-CCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf 1899999999999982-786866588767432578886999999999999849988878854875589999999999838
No 10
>>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* (A:1-63)
Probab=99.44 E-value=5.5e-14 Score=98.91 Aligned_cols=62 Identities=11% Similarity=0.156 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCC
Q ss_conf 999999999999836999988487867454206571009999999999838834888985058
Q gi|254780534|r 7 DVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKIL 69 (85)
Q Consensus 7 ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~ 69 (85)
++.+++++++++.+ ++++++|+|+++|.+|||||||+.++++..+|++||++||++++.+++
T Consensus 2 ~i~~~l~~iia~~l-~i~~~~i~~~~~~~~dlg~DSL~~~el~~~iE~~F~i~i~~~~~~~ik 63 (63)
T 2kci_A 2 PTLDALTPIFRQVF-DDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLK 63 (63)
T ss_dssp CSHHHHHHHHHHHT-TCSCCCCCTTCCSTTCCCCCSTHHHHHHHHHHHHHTCCCCHHHHTTCC
T ss_pred CHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCC
T ss_conf 78999999999990-998433566766013578658999999999999968986899997189
No 11
>>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens} (A:)
Probab=99.44 E-value=3.4e-13 Score=94.47 Aligned_cols=82 Identities=29% Similarity=0.545 Sum_probs=76.0
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 87858999999999999836999988487867454206571009999999999838834888985058899999999985
Q gi|254780534|r 2 PNANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKA 81 (85)
Q Consensus 2 ~~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~ 81 (85)
.+..+++.++|++++++.+ +++++.+.++++|..|||+|||..++++..++++||++++..++.++.||++++.||..+
T Consensus 10 ~~~~~~~~~~i~~~~~~~l-g~~~~~i~~~~~~~~dlG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~~i~~~ 88 (99)
T 2dnw_A 10 PLTLEGIQDRVLYVLKLYD-KIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADK 88 (99)
T ss_dssp CCCHHHHHHHHHHHHHHCT-TSCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH-CCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHC
T ss_conf 8899999999999999997-888766488865788748658899999999999979877877875479999999999977
Q ss_pred HHC
Q ss_conf 537
Q gi|254780534|r 82 KQT 84 (85)
Q Consensus 82 ~~~ 84 (85)
...
T Consensus 89 ~~~ 91 (99)
T 2dnw_A 89 KDV 91 (99)
T ss_dssp CCS
T ss_pred CCC
T ss_conf 587
No 12
>>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} (A:)
Probab=99.42 E-value=3.7e-13 Score=94.23 Aligned_cols=79 Identities=48% Similarity=0.738 Sum_probs=73.9
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 78589999999999998369999884878674542065710099999999998388348889850588999999999855
Q gi|254780534|r 3 NANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAK 82 (85)
Q Consensus 3 ~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~ 82 (85)
+..+++..+|++++++.+ +++++.+.++++|.+|||+|||..++|+..++++||+++|..++.++.|++++++||.+++
T Consensus 18 ~~~~~i~~~l~~~~~~~l-~~~~~~i~~~~~~~~dlG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~ti~~la~~i~~~~ 96 (97)
T 3ejb_A 18 SHMSTIEERVKKIIGEQL-GVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQ 96 (97)
T ss_dssp CCCCCHHHHHHHHHHHHS-CCCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHHH-CCCCCEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCC
T ss_conf 987899999999999986-8980000420767772478789999999999998589989999974898999999998852
No 13
>>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.30A {Aquifex aeolicus VF5} PDB: 2eht_A (A:)
Probab=99.42 E-value=8e-13 Score=92.39 Aligned_cols=76 Identities=50% Similarity=0.825 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHC
Q ss_conf 99999999999836999988487867454206571009999999999838834888985058899999999985537
Q gi|254780534|r 8 VFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQT 84 (85)
Q Consensus 8 i~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~~ 84 (85)
+.+++++++++.+ +++++.|.++++|.+|||+||+..++++..++++||+++|..++.+..|++++++||.++..+
T Consensus 2 i~~~l~~~~~~~l-~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~i~~~~~v~i~~~~~~~~~ti~~l~~~i~~~~~a 77 (77)
T 2ehs_A 2 LEERVKEIIAEQL-GVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEKVGG 77 (77)
T ss_dssp HHHHHHHHHHHHH-CCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHH-CCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf 9999999999998-959988697513898839858889999999999878999999987399999999999987186
No 14
>>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynthesis, lipid transport; HET: PSR; 1.20A {Escherichia coli} (A:)
Probab=99.39 E-value=9.5e-13 Score=91.96 Aligned_cols=76 Identities=49% Similarity=0.770 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 89999999999998369999884878674542065710099999999998388348889850588999999999855
Q gi|254780534|r 6 DDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAK 82 (85)
Q Consensus 6 ~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~ 82 (85)
.++..++++++++.+ ++++..|.++++|.+|||+||+..++++..++++||+++|..++.+..|++++++||.+++
T Consensus 2 ~~~~~~l~~i~a~~l-~~~~~~i~~~~~~~~dlG~dSl~~~~l~~~l~~~~g~~i~~~~~~~~~Ti~~la~~i~~~~ 77 (78)
T 1l0i_A 2 STIEERVKKIIGEQL-GVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYINGHQ 77 (78)
T ss_dssp CCHHHHHHHHHHHHH-TCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHH-CCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCC
T ss_conf 389999999999998-8698874753000224797289999999999999889989999863999999999998772
No 15
>>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 2.00A {Thermotoga maritima MSB8} (A:)
Probab=99.36 E-value=1.9e-12 Score=90.22 Aligned_cols=80 Identities=31% Similarity=0.514 Sum_probs=73.8
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 78589999999999998369999884878674542065710099999999998388348889850588999999999855
Q gi|254780534|r 3 NANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAK 82 (85)
Q Consensus 3 ~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~ 82 (85)
....++..+|++++++.+ +++++.|.++++|. +||+|||..++++..++++||++||..++.++.||++++.||.++.
T Consensus 13 ~~~~~~~~~l~~~~a~~l-~~~~~~i~~~~~f~-~lG~dSl~~~~l~~~i~~~~gi~i~~~~l~~~~Ti~~la~~i~~~~ 90 (100)
T 1vku_A 13 XERKKLIAKFVEIASEKX-GKDLETVDEENTFK-ELGFDSIDVIDLVXFFEDEFALRIEDEEISKIRKVKDLIDIVIKKL 90 (100)
T ss_dssp THHHHHHHHHHHHHHHTT-CCCCCSCCTTSBTT-TTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH-CCCHHHCCCCCCHH-HHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999998-91998889998988-8688517799999998535588748999998101999999999987
Q ss_pred HC
Q ss_conf 37
Q gi|254780534|r 83 QT 84 (85)
Q Consensus 83 ~~ 84 (85)
+.
T Consensus 91 ~~ 92 (100)
T 1vku_A 91 EE 92 (100)
T ss_dssp HH
T ss_pred HC
T ss_conf 14
No 16
>>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein family, structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A (A:)
Probab=99.29 E-value=1.7e-11 Score=85.01 Aligned_cols=78 Identities=15% Similarity=0.108 Sum_probs=72.9
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 78589999999999998369999884878674542065710099999999998388348889850588999999999855
Q gi|254780534|r 3 NANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAK 82 (85)
Q Consensus 3 ~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~ 82 (85)
....++.++++.++++.+ ++++++|.++++|. ++|+||+..++++..++++||++++..++.+..|+++++.||.++.
T Consensus 10 ~~~~~~~~~l~~~~~~~l-~~~~~~i~~~~~f~-~lG~DSl~~~~l~~~l~~~~~~~i~~~~l~~~~ti~~la~~l~~~l 87 (88)
T 2afd_A 10 ASVEDIQSWLIDQFAQQL-DVDPDDIDMEESFD-NYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGELY 87 (88)
T ss_dssp SSHHHHHHHHHHHHHHHH-TSCGGGCCTTSCGG-GTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHH-CCCHHHCCCCCCHH-HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHC
T ss_conf 999999999999999998-95998879998989-9288608899999999975055788999980999999999999864
No 17
>>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} (A:)
Probab=99.28 E-value=6.3e-12 Score=87.34 Aligned_cols=80 Identities=19% Similarity=0.260 Sum_probs=74.1
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 87858999999999999836999988487867454206571009999999999838834888985058899999999985
Q gi|254780534|r 2 PNANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKA 81 (85)
Q Consensus 2 ~~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~ 81 (85)
+.+..++.+++++++++.+ +++++.|.++++|. ++|+|||..++++..++++||++||..++.+..|++++++||..+
T Consensus 3 ~~~~~~~~~~l~~~~a~~l-~~~~~~i~~~~~f~-~lG~DSl~~~~l~~~i~~~~~i~i~~~~~~~~~ti~~l~~~i~~~ 80 (95)
T 1nq4_A 3 LLTLSDLLTLLRECAGEEE-SIDLGGDVEDVAFD-ALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNAS 80 (95)
T ss_dssp CCCHHHHHHHHHHHHTCSS-TTCSCSCCSSSCHH-HHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH-CCCCCCCCCCCCHH-HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
T ss_conf 3589999999999998871-88810077999998-919869889999999999998985899997599999999999976
Q ss_pred HH
Q ss_conf 53
Q gi|254780534|r 82 KQ 83 (85)
Q Consensus 82 ~~ 83 (85)
..
T Consensus 81 ~~ 82 (95)
T 1nq4_A 81 LT 82 (95)
T ss_dssp HH
T ss_pred CC
T ss_conf 46
No 18
>>3lmo_A Specialized acyl carrier protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Rhodopseudomonas palustris} (A:)
Probab=99.24 E-value=1.8e-12 Score=90.43 Aligned_cols=78 Identities=19% Similarity=0.354 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHC
Q ss_conf 8999999999999836999988487867454206571009999999999838834888985058899999999985537
Q gi|254780534|r 6 DDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQT 84 (85)
Q Consensus 6 ~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~~ 84 (85)
.++..+|++++++.+ ++++.+|.++.+|..|||+|||..++++..++++||+.++.+++.+..||+++++||..+...
T Consensus 2 ~~i~~~l~~i~a~~l-~~~~~~i~~~~~~~~dlG~DSl~~~~l~~~l~~~~gi~l~~~~~~~~~ti~~l~~~i~~~~~~ 79 (101)
T 3lmo_A 2 TSTFDRVATIIAETC-DIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKN 79 (101)
T ss_dssp CCHHHHHHHHHHHHT-TCCGGGCCTTCBSSSSTTCCHHHHHHHHHHHHHHHTCCCCHHHHHHHHHTTSCCTHHHHBHHH
T ss_pred CHHHHHHHHHHHHHH-CCCHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 689999999999997-868876498503798728547899999999999988997999997089899999999999882
No 19
>>1af8_A Actinorhodin polyketide synthase acyl carrier protein; solution structure, structure, antibiotic biosynthesis; NMR {Streptomyces coelicolor} (A:)
Probab=99.24 E-value=2.3e-12 Score=89.84 Aligned_cols=81 Identities=23% Similarity=0.319 Sum_probs=74.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 87858999999999999836999988487867454206571009999999999838834888985058899999999985
Q gi|254780534|r 2 PNANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKA 81 (85)
Q Consensus 2 ~~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~ 81 (85)
+...+.+..++++++++.+ ++++++|.++++|. ++|+|||..++++..++++||++||..++.+..|++++++||.++
T Consensus 4 ~~~~~~~~~~l~~~~~~~l-~~~~~~i~~~~~~~-~lG~DSl~~~~l~~~l~~~~gi~i~~~~l~~~~Ti~~l~~~i~~~ 81 (86)
T 1af8_A 4 LLTTDDLRRALVECAGETD-GTDLSGDFLDLRFE-DIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGA 81 (86)
T ss_dssp SSCHHHHHHHHHTTCCCCS-CCCTTTCSSTTSTT-TTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCHH-CCCCCCCCCCCCHH-HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHH
T ss_conf 3369999999999976020-78921043678998-829839889999999998862788999997199999999999977
Q ss_pred HHC
Q ss_conf 537
Q gi|254780534|r 82 KQT 84 (85)
Q Consensus 82 ~~~ 84 (85)
...
T Consensus 82 ~~~ 84 (86)
T 1af8_A 82 LAE 84 (86)
T ss_dssp HHH
T ss_pred HHC
T ss_conf 653
No 20
>>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, structural genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} (A:)
Probab=99.24 E-value=3.2e-11 Score=83.38 Aligned_cols=81 Identities=20% Similarity=0.302 Sum_probs=71.4
Q ss_pred CCHHHHHHHHHHHHHHHHCC-CCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHH--CCCCHHHHHHHHH
Q ss_conf 78589999999999998369-99988487867454206571009999999999838834888985--0588999999999
Q gi|254780534|r 3 NANDDVFEAVKEVILSQLTS-VKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESAN--KILTVKDAVDFIR 79 (85)
Q Consensus 3 ~t~~ei~~~v~~ii~~~l~~-~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~--~~~Tv~dlv~~I~ 79 (85)
....++.++|++++++.+.. ++++.|.++.+|. +||+|||..++|+..++++||+++|..++. ++.||+.+++||.
T Consensus 18 ~~~~~~~~~i~~~i~~~l~~~~~~~~i~~~~~f~-~lG~DSl~~~~l~~~l~~~~gi~l~~~~l~~~~~~Ti~~la~~i~ 96 (105)
T 2jq4_A 18 YFQGHMNATIREILAKFGQLPTPVDTIADEADLY-AAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVK 96 (105)
T ss_dssp -----CHHHHHHHHHHTSCCSSCGGGCCTTSCGG-GGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHH-HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 9999999999999999866899998959999788-739988899999999999969978989982874267999999999
Q ss_pred HHHHC
Q ss_conf 85537
Q gi|254780534|r 80 KAKQT 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++...
T Consensus 97 ~~~~~ 101 (105)
T 2jq4_A 97 LILDG 101 (105)
T ss_dssp HHHHT
T ss_pred HHHHC
T ss_conf 99846
No 21
>>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopantetheine; 1.83A {Mycobacterium tuberculosis} (A:)
Probab=99.21 E-value=2.5e-11 Score=84.04 Aligned_cols=79 Identities=23% Similarity=0.254 Sum_probs=71.9
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 85899999999999983699998848786745420657100999999999983883488898505889999999998553
Q gi|254780534|r 4 ANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQ 83 (85)
Q Consensus 4 t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~ 83 (85)
...++.++|++++++.+ +++++.+.++.+|. +||+|||..++++..++++||++|+..++.+..||+++++||.++..
T Consensus 23 ~~~~~~~~l~~~~~~~l-~~~~~~i~~~~~~~-~lG~dSl~~~~l~~~l~~~~g~~i~~~~~~~~~Ti~~la~~i~~~~~ 100 (113)
T 2cgq_A 23 FQGAMEEAINATIQRIL-RTDRGITANQVLVD-DLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWFP 100 (113)
T ss_dssp ---CHHHHHHHHHHHHH-TCCSCCCTTCBTTT-TTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHHHHHHC-CCCCCCCCCHHHHH-HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCC
T ss_conf 75499999999999843-76776687505698-84996689999999999998898799999876339999999998551
Q ss_pred C
Q ss_conf 7
Q gi|254780534|r 84 T 84 (85)
Q Consensus 84 ~ 84 (85)
.
T Consensus 101 ~ 101 (113)
T 2cgq_A 101 E 101 (113)
T ss_dssp -
T ss_pred C
T ss_conf 5
No 22
>>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} (A:)
Probab=99.15 E-value=2e-11 Score=84.51 Aligned_cols=79 Identities=15% Similarity=0.323 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHC--CCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 58999999999999836--9999884878674542065710099999999998388348889850588999999999855
Q gi|254780534|r 5 NDDVFEAVKEVILSQLT--SVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAK 82 (85)
Q Consensus 5 ~~ei~~~v~~ii~~~l~--~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~ 82 (85)
..++.++++.++++.+. ...++.|+++++|. ++|+|||..+++...++++||+++|..++.+..|+++++.||.++.
T Consensus 2 s~~~~~~i~~~~~~~l~~~~~~~~~i~~~~~f~-~lG~DSl~~~~l~~~i~~~~~~~i~~~~l~~~~Ti~~la~~i~~~~ 80 (83)
T 1or5_A 2 SALTVDDLKKLLAETAGEDDSVDLAGELDTPFV-DLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNTTP 80 (83)
T ss_dssp CCSCHHHHHHHHHHHSCCCSSCCGGGCSSSCHH-HHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH-HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCC
T ss_conf 522299999999999788756666666575898-8099578899999999999889989899963999999999996246
Q ss_pred HC
Q ss_conf 37
Q gi|254780534|r 83 QT 84 (85)
Q Consensus 83 ~~ 84 (85)
..
T Consensus 81 ~~ 82 (83)
T 1or5_A 81 AT 82 (83)
T ss_dssp SC
T ss_pred CC
T ss_conf 69
No 23
>>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A (A:)
Probab=99.12 E-value=2e-10 Score=78.90 Aligned_cols=77 Identities=18% Similarity=0.252 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 589999999999998369999884878674542065710099999999998388348889850588999999999855
Q gi|254780534|r 5 NDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAK 82 (85)
Q Consensus 5 ~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~ 82 (85)
...+.++|++++++.+...++++|.++++|. ++|+|||..+++...++++||++++..++.+..|+++++.||.++.
T Consensus 18 ~~~~~~~i~~~~~~~L~~~~~~~i~~~~~f~-~lG~dSl~~~~l~~~l~~~~g~~i~~~~~~~~~Ti~~la~~i~~~l 94 (95)
T 2ju1_A 18 TAELVRLVRTSTATVLGHDDPKAVRATTPFK-ELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAEL 94 (95)
T ss_dssp HHHHHHHHHHHHHHHTTCCCGGGCCSSSCHH-HHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCCCCCHH-HCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHC
T ss_conf 9999999999999995899876669998878-7088649999999999887087878899970899999999999873
No 24
>>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} (A:)
Probab=99.11 E-value=3.8e-12 Score=88.60 Aligned_cols=78 Identities=18% Similarity=0.257 Sum_probs=71.4
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 85899999999999983699998848786745420657100999999999983883488898505889999999998553
Q gi|254780534|r 4 ANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQ 83 (85)
Q Consensus 4 t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~ 83 (85)
..+++.++|++++++.+ ++++++|.++++|. ++|+|||..++++..++++||+++|..++.+..|++++++||....+
T Consensus 9 ~~~~i~~~i~~i~a~~l-~~~~~~i~~~~~f~-~lG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~Ti~~la~~i~~~~~ 86 (92)
T 1fh1_A 9 IISAINKLVKAENGERT-SVALGEITTDTELT-SLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVEAVRG 86 (92)
T ss_dssp HHHHHHHHC------------------------------CTTTTHHHHHHHC-----------------CTTTSTHHHHC
T ss_pred HHHHHHHHHHHHHHHHH-CCCHHHCCCCCCHH-HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
T ss_conf 99999999999999997-98998969998888-85700489999999999998987678998717999999999999651
No 25
>>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensation domain, peptide bond formation, ligase, antibiotics; 1.85A {Brevibacillus brevis} (A:1-87)
Probab=98.99 E-value=8.9e-10 Score=75.32 Aligned_cols=77 Identities=17% Similarity=0.247 Sum_probs=69.2
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 85899999999999983699998848786745420657100999999999983883488898505889999999998553
Q gi|254780534|r 4 ANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQ 83 (85)
Q Consensus 4 t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~ 83 (85)
-..++..++++++++.+. ...|.++++|. ++|+|||..++++..++++||+++|..++.+..||+.++.|+..+..
T Consensus 7 ~~~~~~~~l~~~~~~iL~---~~~i~~~~~f~-~~G~dSl~~~~l~~~i~~~~g~~l~~~~~~~~~Ti~~la~~l~~~~~ 82 (87)
T 2jgp_A 7 PRSVWEARLAQVWEQVLN---VPQVGALDDFF-ALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEETAK 82 (87)
T ss_dssp CCSHHHHHHHHHHHHHHT---CSCCCTTCBTT-TTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHCCT
T ss_pred CCCHHHHHHHHHHHHHCC---CCCCCCCCCHH-HHCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 829999999999999839---99889999977-85278999999999999866997189999679979999999886366
Q ss_pred C
Q ss_conf 7
Q gi|254780534|r 84 T 84 (85)
Q Consensus 84 ~ 84 (85)
.
T Consensus 83 ~ 83 (87)
T 2jgp_A 83 G 83 (87)
T ss_dssp T
T ss_pred C
T ss_conf 7
No 26
>>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens} (A:)
Probab=98.97 E-value=2.2e-09 Score=73.16 Aligned_cols=79 Identities=29% Similarity=0.298 Sum_probs=69.9
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHH-CCCCCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 785899999999999983699998848786745420657100999999999983-8834888985058899999999985
Q gi|254780534|r 3 NANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKF-SLEIPEESANKILTVKDAVDFIRKA 81 (85)
Q Consensus 3 ~t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f-~i~i~~~~~~~~~Tv~dlv~~I~~~ 81 (85)
....++...+++++++.+ ..++.|.++++|. ++|+|||..++++..|+++| |++++..++.++.|++.++.|+...
T Consensus 21 ~~~~~~~~~l~~i~~~~~--~~~~~i~~d~~f~-~lG~dSl~av~l~~~l~~~~~g~~l~~~~l~~~pTi~~La~~l~~~ 97 (110)
T 2cq8_A 21 EAELVTAEAVRSVWQRIL--PKVLEVEDSTDFF-KSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRK 97 (110)
T ss_dssp TTHHHHHHHHHHHHHHHC--SSCSCCCTTCBHH-HHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHC--CCCCCCCCCCCHH-HHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 875199999999999876--9998669998988-8338788999999999997287730299999860899999999998
Q ss_pred HHC
Q ss_conf 537
Q gi|254780534|r 82 KQT 84 (85)
Q Consensus 82 ~~~ 84 (85)
...
T Consensus 98 ~~~ 100 (110)
T 2cq8_A 98 LRG 100 (110)
T ss_dssp HHH
T ss_pred HCC
T ss_conf 437
No 27
>>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} (A:)
Probab=98.91 E-value=3e-09 Score=72.38 Aligned_cols=77 Identities=16% Similarity=0.244 Sum_probs=68.8
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 85899999999999983699998848786745420657100999999999983883488898505889999999998553
Q gi|254780534|r 4 ANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQ 83 (85)
Q Consensus 4 t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~ 83 (85)
-..++..+|++++++.+. ...+.++.+|. ++|+|||..+++...++++||++++..++.+..|+++++.|+..+..
T Consensus 11 ~~~~l~~~l~~~~~~vL~---~~~i~~~~~f~-~~G~dSl~~~~l~~~i~~~~g~~i~~~~~~~~pTi~~La~~l~~~~~ 86 (91)
T 1dny_A 11 PTNAVESKLAEIWERVLG---VSGIGILDNFF-QIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATRSH 86 (91)
T ss_dssp CSSHHHHHHHHHHHHHHT---CSSCCSSCCTT-SSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC---
T ss_pred CCCHHHHHHHHHHHHHCC---CCCCCCCCCHH-HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 789999999999999808---98779887676-51897789999999999997898679999858979999999998264
Q ss_pred C
Q ss_conf 7
Q gi|254780534|r 84 T 84 (85)
Q Consensus 84 ~ 84 (85)
.
T Consensus 87 ~ 87 (91)
T 1dny_A 87 H 87 (91)
T ss_dssp -
T ss_pred C
T ss_conf 4
No 28
>>2roq_A Enterobactin synthetase component F; T-TE, PCP, thioesterase, peptidyl carrier protein, thiolation domain, non-ribosomal peptide synthetase; NMR {Escherichia coli} (A:1-91)
Probab=98.88 E-value=1e-09 Score=74.97 Aligned_cols=78 Identities=15% Similarity=0.159 Sum_probs=69.2
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 85899999999999983699998848786745420657100999999999983883488898505889999999998553
Q gi|254780534|r 4 ANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQ 83 (85)
Q Consensus 4 t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~ 83 (85)
...++..+|++++++.+. ...+.++.+|. ++|+|||..++++..++++||++|+..++.+..|+++++.|+..+..
T Consensus 14 ~~~~~e~~l~~~~~~~L~---~~~i~~~~~f~-~lG~dSl~a~~l~~~i~~~~g~~i~~~~l~~~pTi~~la~~l~~~~~ 89 (91)
T 2roq_A 14 PKAGSETIIAAAFSSLLG---CDVQDADADFF-ALGGHALLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAEED 89 (91)
T ss_dssp CCSSHHHHHHHHHHHHTT---SSCCCSSCCHH-HHTCCTTHHHHHHHHHHHHSSSCCCTTSSSSSSCHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHHHHHC---CCCCCCCCCHH-HCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHC
T ss_conf 769999999999999818---89879999936-76846999999999999997898789999985235778887653100
Q ss_pred CC
Q ss_conf 79
Q gi|254780534|r 84 TN 85 (85)
Q Consensus 84 ~n 85 (85)
+.
T Consensus 90 ~s 91 (91)
T 2roq_A 90 ST 91 (91)
T ss_dssp CC
T ss_pred CC
T ss_conf 12
No 29
>>2cg5_B Fatty acid synthase; transferase/hydrolase, transferase/hydrolase (complex), fatty acid biosynthesis, phosphopantetheine transferase, FAsn, ACP; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A (B:)
Probab=98.81 E-value=5.7e-09 Score=70.82 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHC
Q ss_conf 58999999999999836999988487867454206571009999999999838834888985058899999999985537
Q gi|254780534|r 5 NDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQT 84 (85)
Q Consensus 5 ~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~~ 84 (85)
..++..++++++++.+...+++.|.++++|. +||+|||..++++..++++||+.++..++.+ .|+++++.|+.++...
T Consensus 4 ~~~~~~~l~~~~~~~L~~~~~~~i~~~~~f~-~lG~dSl~a~~l~~~i~~~~~~~l~~~~l~~-~Ti~~la~~l~~~~~~ 81 (91)
T 2cg5_B 4 DRDSQRDLVEAVAHILGIRDLAAVNLDSSLA-DLGLDALMSVEVRQTLERELNLVLSVREVRQ-LTLRKLQELSSKADEA 81 (91)
T ss_dssp ----CTTHHHHHHHHTTCCSCTTSCTTSBTT-TTTCCHHHHHHHHHHHHHHHCCCCCHHHHHT-CBHHHHHHHHHCC---
T ss_pred CHHHHHHHHHHHHHHHCCCCHHHCCCCCCHH-HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHC-CHHHHHHHHHHCCCCC
T ss_conf 5089999999999997899786769998988-9576589999999999999889978999977-0088999998333677
No 30
>>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, termination module, phosphopantetheine; 2.6A {Bacillus subtilis} (A:956-1041)
Probab=98.75 E-value=3.6e-09 Score=71.94 Aligned_cols=73 Identities=14% Similarity=0.292 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH
Q ss_conf 85899999999999983699998848786745420657100999999999983883488898505889999999998
Q gi|254780534|r 4 ANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRK 80 (85)
Q Consensus 4 t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~ 80 (85)
....+..+|++++++.+. .+.+.++++|. +||+|||..++++..++++||++++..++.+..||++++.||..
T Consensus 14 ~~~~~~~~i~~~~~~~L~---~~~i~~~~~f~-~lG~dSl~a~~l~~~l~~~~g~~i~~~~l~~~pTi~~La~~l~~ 86 (86)
T 2vsq_A 14 PRNEMEETIAQIWSEVLG---RKQIGIHDDFF-ALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKN 86 (86)
T ss_dssp CSSHHHHHHHHHHHHHHT---CSCCCTTCCTT-TTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHC---CCCCCCCCCHH-HHCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHH
T ss_conf 222210678999999839---98789988846-64143237999999999987899789998739989999999973
No 31
>>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* (A:40-205)
Probab=98.49 E-value=1.7e-08 Score=68.17 Aligned_cols=58 Identities=14% Similarity=0.146 Sum_probs=52.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 85899999999999983699998848786745420657100999999999983883488
Q gi|254780534|r 4 ANDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPE 62 (85)
Q Consensus 4 t~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~ 62 (85)
...++.+.|+++|++.+ +++++.|.++++|..|||+||+..++|+..++++||+.++.
T Consensus 104 ~~~~~~~~v~~~vA~~~-g~~~~~i~~d~~l~~DlGiDSi~~~el~~~l~~~fg~~~~~ 161 (166)
T 2uv9_A 104 APVTATDVIRALVAQKL-KKELTEIPPSKAIKDLVGGKSTLQNEILGDLGKEFGSTPEK 161 (166)
T ss_dssp -----------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHH-CCCHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 88798999999999996-59965678201088861882166778988888871799974
No 32
>>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli} (A:212-287)
Probab=98.48 E-value=1e-07 Score=63.77 Aligned_cols=74 Identities=22% Similarity=0.271 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHH
Q ss_conf 899999999999983699998848786745420657100999999999983883488898505889999999998553
Q gi|254780534|r 6 DDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKDAVDFIRKAKQ 83 (85)
Q Consensus 6 ~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~~~~~ 83 (85)
.++.+.+++++++.+. -++.|.++++|. ++|.||+..+.+...++ +||+.++..++.+..|+++++.|+.++++
T Consensus 3 ~~~e~~l~~~~~~vL~--~~~~i~~~~~ff-~lG~dSl~a~~l~~~l~-~~g~~i~~~~i~~~pTi~~la~~l~~~~~ 76 (76)
T 2fq1_A 3 PASKAALREVILPLLD--ESDEPFDDDNLI-DYGLDSVRMMALAARWR-KVHGDIDFVMLAKNPTIDAWWKLLSREVK 76 (76)
T ss_dssp CSSHHHHHHHHGGGCC--CSSCCCTTSCSG-GGTCCTTHHHHHHHHHT-TTCTTCCHHHHHTSCSHHHHHHHHHCC--
T ss_pred CCCCHHHHHHHHHHHC--CCCCCCCCHHHH-HHCCCHHHHHHHHHHHH-HCCCCCCHHHHHHCCCHHHHHHHHHHHCC
T ss_conf 4332169889998727--865568961388-81755999999999999-84998779998647689999999987609
No 33
>>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma} (A:38-84)
Probab=96.12 E-value=0.0055 Score=37.29 Aligned_cols=34 Identities=38% Similarity=0.552 Sum_probs=30.6
Q ss_pred HHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCC
Q ss_conf 4206571009999999999838834888985058
Q gi|254780534|r 36 EELGADSLDVVELVMIFEEKFSLEIPEESANKIL 69 (85)
Q Consensus 36 ~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~ 69 (85)
++-.||-||.++++..+|+.|++.||++.+.+++
T Consensus 14 d~R~WD~LDTveF~~DvE~~F~vtipDEtaDN~~ 47 (47)
T 3ce7_A 14 EDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQ 47 (47)
T ss_dssp TSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCC
T ss_pred HHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCC
T ss_conf 6308877999999999998708987877887559
No 34
>>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* (A:1110-1120,A:1882-2512)
Probab=93.85 E-value=0.012 Score=35.32 Aligned_cols=63 Identities=19% Similarity=0.245 Sum_probs=49.5
Q ss_pred HHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHC--CCCHHHHHHHHH
Q ss_conf 9998369999884878674542065710099999999998388348889850--588999999999
Q gi|254780534|r 16 ILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANK--ILTVKDAVDFIR 79 (85)
Q Consensus 16 i~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~--~~Tv~dlv~~I~ 79 (85)
............+.++.+|. ++|.|||..+++...++++||+.++...+.. ..++.++.....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~-~lG~dSl~a~~l~~~l~~~~~~~~~~~~i~~~~~~~l~~l~~~~~ 326 (642)
T 2vz8_A 262 VAHILGIRDVASINPDSTLV-DLGLDSLMGVEVRQILEREHDLVLSMREVRQLSLRKLQELSSKTS 326 (642)
T ss_dssp ------------------------------------------------------------------
T ss_pred HHHHHCCCCHHHCCCCCCHH-HCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 99984899866679998968-838616899999999999978975899998765999999985002
No 35
>>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A (A:)
Probab=66.74 E-value=0.21 Score=28.47 Aligned_cols=65 Identities=5% Similarity=-0.132 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHH
Q ss_conf 589999999999998369999884878674542065710099999999998388348889850588999
Q gi|254780534|r 5 NDDVFEAVKEVILSQLTSVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLEIPEESANKILTVKD 73 (85)
Q Consensus 5 ~~ei~~~v~~ii~~~l~~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~~~~~~~~~Tv~d 73 (85)
..+++.++..|-++.+ + .+.|.-+.+|. +||-|||..+.++..+...+++.++-..+....|+..
T Consensus 7 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (319)
T 2hfk_A 7 HHHHSSGLVPRGSHMS-G--ADTGAGAGMFR-ALFRQAVEDDRYGEFLDVLAEASAFRPQFASPEACSE 71 (319)
T ss_dssp --------------------------CCHHH-HHHHHHHHTTCHHHHHHHHHHHHTTSCEECSGGGCCS
T ss_pred CCCCCCCCCCCCCCCC-C--CCCCCCCHHHH-HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 4444578777787778-7--67777416899-9999999858867899999999974535568532246
No 36
>>1rqt_A L8, 50S ribosomal protein L7/L12; protein L7/L12,ribosome,; NMR {Escherichia coli} (A:)
Probab=66.57 E-value=3.8 Score=21.37 Aligned_cols=21 Identities=43% Similarity=0.670 Sum_probs=17.5
Q ss_pred CCHHHHHHHHHHHHHHHCCCC
Q ss_conf 571009999999999838834
Q gi|254780534|r 40 ADSLDVVELVMIFEEKFSLEI 60 (85)
Q Consensus 40 ~DSLd~vel~~~lE~~f~i~i 60 (85)
.--++++|++...|++||++-
T Consensus 14 MSVmdvveLi~aMEeKFGVsa 34 (37)
T 1rqt_A 14 MSVMDVVELISAMEEKFGVSA 34 (37)
T ss_dssp SCHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHCCCC
T ss_conf 319999999999999848774
No 37
>>2oai_A Hemolysin; PFAM03471, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MLY; 1.80A {Xylella fastidiosa TEMECULA1} (A:)
Probab=55.24 E-value=8.8 Score=19.32 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=26.0
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHHH
Q ss_conf 9999998388348889850588999999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFIR 79 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I~ 79 (85)
+..+++.||+.+|.++-.++.|++.++-.-.
T Consensus 28 l~~l~~~~~~~l~~~~~~~~~TigG~i~~~l 58 (94)
T 2oai_A 28 IEELREVLGAELPDGEENNYHTLAGXCISYF 58 (94)
T ss_dssp HHHHHHHHTC-------CCCSBHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9999998788998544455213999999986
No 38
>>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} (A:)
Probab=41.31 E-value=26 Score=16.67 Aligned_cols=58 Identities=12% Similarity=0.201 Sum_probs=47.3
Q ss_pred CCCHHHHHHHHHHHHHHHHC--CCCHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 87858999999999999836--99998848786745420657100999999999983883
Q gi|254780534|r 2 PNANDDVFEAVKEVILSQLT--SVKEDQIVESARFIEELGADSLDVVELVMIFEEKFSLE 59 (85)
Q Consensus 2 ~~t~~ei~~~v~~ii~~~l~--~~~~~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~ 59 (85)
.+|..+|..++-+.|.++=- .-+...|..|..|..=+|-|++.+.+|...|..+|--.
T Consensus 34 ~~sr~~v~k~lw~YIk~~~Lqdp~~k~~I~cD~~Lk~lfg~~~v~~~~l~~lL~~Hl~~~ 93 (101)
T 1v32_A 34 MISRYDVSDTIAKYISKEGLLDPSNKKKVVCDKRLVLLFGTRTIFRMKVYDLLEKHYKEN 93 (101)
T ss_dssp CCCHHHHHHHHHHHHHHHTCBCSSCTTEEECCSHHHHHTCCSEEETTHHHHHHHHHSCSC
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
T ss_conf 567999999999999994666765453256039999986889555877999999875886
No 39
>>1dd3_A 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; 2.00A {Thermotoga maritima} (A:1-57)
Probab=37.86 E-value=18 Score=17.62 Aligned_cols=24 Identities=25% Similarity=0.373 Sum_probs=18.4
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 657100999999999983883488
Q gi|254780534|r 39 GADSLDVVELVMIFEEKFSLEIPE 62 (85)
Q Consensus 39 g~DSLd~vel~~~lE~~f~i~i~~ 62 (85)
++.=|..-||+-.+|++||++-..
T Consensus 12 ~ltllE~sELVk~iEe~FgVsAaa 35 (57)
T 1dd3_A 12 KLTVSELAELVKKLEDKFGVTAAA 35 (57)
T ss_dssp TSCHHHHHHHHHHHHHHHCHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 098999999999999997988664
No 40
>>1h99_A Transcription antiterminator LICT; transcriptional antiterminator, PTS regulatory domain; 1.55A {Bacillus subtilis} (A:1-114)
Probab=37.31 E-value=33 Score=16.15 Aligned_cols=23 Identities=22% Similarity=0.368 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHC
Q ss_conf 99999999998388348889850
Q gi|254780534|r 45 VVELVMIFEEKFSLEIPEESANK 67 (85)
Q Consensus 45 ~vel~~~lE~~f~i~i~~~~~~~ 67 (85)
..+++..+|+.|++++|++++.-
T Consensus 80 a~~~~~~ie~~~~i~i~~~Ei~y 102 (114)
T 1h99_A 80 GKEALVMVKNKTGVSLPEDEAGF 102 (114)
T ss_dssp HHHHHHHHHHHHSCCCCHHHHHH
T ss_pred CHHHEEEEECCCCCCCCCCCCCE
T ss_conf 62225887447676687544462
No 41
>>2bnk_A Early protein GP16.7; DNA-binding protein; 2.9A {Bacillus phage PHI29} (A:)
Probab=35.16 E-value=35 Score=15.95 Aligned_cols=35 Identities=14% Similarity=0.426 Sum_probs=27.9
Q ss_pred HHHHHHHHCCCCCHHHH-----HCCCCHHHHHHHHHHHHH
Q ss_conf 99999983883488898-----505889999999998553
Q gi|254780534|r 49 VMIFEEKFSLEIPEESA-----NKILTVKDAVDFIRKAKQ 83 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~-----~~~~Tv~dlv~~I~~~~~ 83 (85)
+..+=++-||+||-+-+ .+++|=.++.+||+.++.
T Consensus 12 vLDlYe~SnIrIP~DIIEd~~~~~L~te~eVmnYiE~qR~ 51 (67)
T 2bnk_A 12 VLDLYEQSNIRIPSDIIEDLVNQRLQSEQEVLNYIETQRT 51 (67)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHTTCCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9989987088673899999998754029999999986577
No 42
>>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} (A:)
Probab=29.13 E-value=33 Score=16.13 Aligned_cols=27 Identities=15% Similarity=0.128 Sum_probs=21.2
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 999999838834888985058899999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFI 78 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I 78 (85)
+..+++.||+++|+++ +.|++.++-..
T Consensus 18 l~d~~~~~~~~l~~~~---~~Tl~G~i~~~ 44 (87)
T 2rk5_A 18 LNDFNEYFETDLESDN---VDTIAGFYLTG 44 (87)
T ss_dssp HHHHHHHHTCCCCCTT---CCBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCC---HHHHHHHHHHH
T ss_conf 9999998698999875---15599999998
No 43
>>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, structural genomics PSI-2, protein structure initiative; 2.15A {Chlorobium tepidum tls} (A:)
Probab=29.05 E-value=29 Score=16.40 Aligned_cols=30 Identities=13% Similarity=0.240 Sum_probs=23.0
Q ss_pred HHHHHHHHCCCCCHHH-HHCCCCHHHHHHHH
Q ss_conf 9999998388348889-85058899999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEES-ANKILTVKDAVDFI 78 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~-~~~~~Tv~dlv~~I 78 (85)
+..+++.||+.+|.++ -..+.|++.++-..
T Consensus 19 l~dl~~~l~~~l~~~e~~~~~~Ti~G~i~~~ 49 (86)
T 2pls_A 19 VPELKDTLGLRAVPEEEKGVYHTLSGXIXWL 49 (86)
T ss_dssp HHHHHHHHTCSCCTTTTSCSCCBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 9999998788998621145544799999997
No 44
>>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} (C:)
Probab=28.27 E-value=46 Score=15.34 Aligned_cols=23 Identities=26% Similarity=0.390 Sum_probs=16.9
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 65710099999999998388348
Q gi|254780534|r 39 GADSLDVVELVMIFEEKFSLEIP 61 (85)
Q Consensus 39 g~DSLd~vel~~~lE~~f~i~i~ 61 (85)
++.-+..-|++-.+|++||++-.
T Consensus 12 ~m~v~elnelvka~eekfgvsaa 34 (40)
T 1dd4_C 12 KLTVSELAELVKKLEDKFGVTAA 34 (40)
T ss_dssp TSCHHHHHHHHHHHHHHTCCCSC
T ss_pred HCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 56499999999999998587624
No 45
>>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transport protein; 1.80A {Corynebacterium glutamicum} (A:)
Probab=27.13 E-value=33 Score=16.14 Aligned_cols=27 Identities=19% Similarity=0.128 Sum_probs=21.0
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 999999838834888985058899999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFI 78 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I 78 (85)
+..+++.||+.+|++ ++.|++.++-..
T Consensus 22 l~dl~~~~~~~l~~~---~~dTigG~i~~~ 48 (101)
T 2p3h_A 22 LDEVERAIGYELPEG---DYETISGLLFDH 48 (101)
T ss_dssp HHHHHHHHTSCCCCS---SCCBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCC---CCCCHHHHHHHH
T ss_conf 999999878899877---831599999998
No 46
>>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} PDB: 2o1r_A* (A:)
Probab=26.78 E-value=33 Score=16.09 Aligned_cols=27 Identities=15% Similarity=0.121 Sum_probs=20.8
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 999999838834888985058899999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFI 78 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I 78 (85)
+..+++.||+.+|+++ +.|++.++-..
T Consensus 19 l~dl~e~~~~~l~~~~---~~TigG~i~~~ 45 (81)
T 3lae_A 19 LRDLNKXFNWELDTED---ARTFNGLILEH 45 (81)
T ss_dssp HHHHHHHHCCCCCCSS---CSBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCC---CHHHHHHHHHH
T ss_conf 9999998785998775---35199999998
No 47
>>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} (A:)
Probab=25.62 E-value=21 Score=17.26 Aligned_cols=59 Identities=10% Similarity=0.118 Sum_probs=47.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCH---HHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 878589999999999998369999---884878674542065710099999999998388348
Q gi|254780534|r 2 PNANDDVFEAVKEVILSQLTSVKE---DQIVESARFIEELGADSLDVVELVMIFEEKFSLEIP 61 (85)
Q Consensus 2 ~~t~~ei~~~v~~ii~~~l~~~~~---~~i~~ds~l~~dLg~DSLd~vel~~~lE~~f~i~i~ 61 (85)
.+|..++..++-+.|..+ ...++ ..|..|..|..=+|-+++.+.+|...+..+|--.=|
T Consensus 26 ~~sr~~v~~~lw~YIk~n-~Lqd~~~k~~I~cD~~L~~lf~~~~v~~~~i~~ll~~Hl~~~~p 87 (93)
T 1v31_A 26 VETRPRIIAAIWHYVKAR-KLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPP 87 (93)
T ss_dssp EECSHHHHHHHHHHHHHT-TCBCSSCSSEEECCSHHHHHSCSSEEETTTTHHHHHHHCBCCCC
T ss_pred CCCHHHHHHHHHHHHHHH-CCCCCCCCCEEECCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 768999999999999673-56546678778477899998489933388899999973799998
No 48
>>1h99_A Transcription antiterminator LICT; transcriptional antiterminator, PTS regulatory domain; 1.55A {Bacillus subtilis} (A:115-224)
Probab=23.54 E-value=57 Score=14.78 Aligned_cols=22 Identities=5% Similarity=0.185 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 9999999999838834888985
Q gi|254780534|r 45 VVELVMIFEEKFSLEIPEESAN 66 (85)
Q Consensus 45 ~vel~~~lE~~f~i~i~~~~~~ 66 (85)
.-+++..+++.||+++|++++.
T Consensus 76 a~~~~~~i~~~~~~~i~~~Ei~ 97 (110)
T 1h99_A 76 TKKIQTYIEREYEHKLTSDELL 97 (110)
T ss_dssp HHHHHHHHHHHHCCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHH
T ss_conf 9999999999998615665643
No 49
>>2r2z_A Hemolysin; APC85144, structure initiative, midwest center for structural genomics, MCSG, PSI-2, protein structure initiative; 1.20A {Enterococcus faecalis V583} (A:)
Probab=22.64 E-value=51 Score=15.05 Aligned_cols=27 Identities=15% Similarity=0.154 Sum_probs=21.0
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 999999838834888985058899999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFI 78 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I 78 (85)
+..+++.||+.+|.+ ++.|++.++-..
T Consensus 26 l~dl~~~~~~~l~~~---~~~Tl~G~i~~~ 52 (93)
T 2r2z_A 26 IDEFNEVFETDLHXS---DVDTXAGYLITA 52 (93)
T ss_dssp HHHHHHHHTCCCCCT---TCCBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCC---CCHHHHHHHHHH
T ss_conf 999999879799876---620299999998
No 50
>>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} (A:)
Probab=22.25 E-value=50 Score=15.12 Aligned_cols=28 Identities=7% Similarity=0.130 Sum_probs=20.7
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 99999983883488898505889999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDF 77 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~ 77 (85)
+..+++.||+.+|++. .++.|++.++--
T Consensus 25 l~d~~~~~~~~l~~e~-~~~~Ti~G~i~~ 52 (90)
T 2p13_A 25 IRKASNLLEHDLVDEA-ERYSTLGGYLLW 52 (90)
T ss_dssp HHHHHHHHTSCCCCTT-CCCCBHHHHHHH
T ss_pred HHHHHHHHCCCCCCCC-CCCCCHHHHHHH
T ss_conf 9999998788999865-554089999999
No 51
>>3d9w_A Putative acetyltransferase; arylamine N-acetyltransferase, NAT, X-RAY diffraction, acyltransferase; 2.70A {Nocardia farcinica} (A:1-59,A:217-293)
Probab=21.50 E-value=40 Score=15.68 Aligned_cols=26 Identities=27% Similarity=0.464 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHCC
Q ss_conf 00999999999983883488898505
Q gi|254780534|r 43 LDVVELVMIFEEKFSLEIPEESANKI 68 (85)
Q Consensus 43 Ld~vel~~~lE~~f~i~i~~~~~~~~ 68 (85)
++.-|+..-+.+.|||.+|+.+...+
T Consensus 97 ~~~~ev~~~L~e~Fgi~l~~~~~a~l 122 (136)
T 3d9w_A 97 LTPGELPEVINELFDIELPGPDLDAL 122 (136)
T ss_dssp CCGGGHHHHHHHTTCCCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 99999999999861986886887544
No 52
>>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, protein structure initiative; 1.70A {Neisseria meningitidis MC58} (A:)
Probab=21.29 E-value=49 Score=15.16 Aligned_cols=27 Identities=19% Similarity=0.041 Sum_probs=21.1
Q ss_pred HHHHHHHHCCCCCHHHHHCCCCHHHHHHHH
Q ss_conf 999999838834888985058899999999
Q gi|254780534|r 49 VMIFEEKFSLEIPEESANKILTVKDAVDFI 78 (85)
Q Consensus 49 ~~~lE~~f~i~i~~~~~~~~~Tv~dlv~~I 78 (85)
+..+++.||+.+|++ ++.|++.++-.-
T Consensus 28 l~dl~~~~~i~l~~~---~~~Tl~G~i~~~ 54 (91)
T 2pli_A 28 IEDINTFFGTEYSSE---EADTIGGLVIQE 54 (91)
T ss_dssp HHHHHHHHCCCCCCS---SCCBHHHHHHHH
T ss_pred HHHHHHHHCCCCCCC---CCHHHHHHHHHH
T ss_conf 999999869999845---314099999998
Done!