HHsearch alignment for GI: 254780535 and conserved domain: KOG1208

Probab=100.00  E-value=6e-35  Score=244.83  Aligned_cols=232  Identities=25%  Similarity=0.359  Sum_probs=193.5

Q ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             678877899938998578999999998899799997898999999997213---89489998889999999999999999
Q gi|254780535|r    2 FDLTGKKALVTGASGSIGLAIAKILYKQGASVGLHGTSQEKLEKVAKNFDD---VDRFLLFPANFSDRVSVEYLSKRVNE   78 (247)
Q Consensus         2 ~~l~~K~~lITG~~~GIG~~ia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~---~g~~~~~~~Dv~~~~~~~~~~~~~~~   78 (247)
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208          31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             66778779995898843799999999579989998477788999999997108776369998799999999999999985


Q ss_pred             HHCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCC-----------
Q ss_conf             976998999678989988754439999999999988999999999999998629984999476233889-----------
Q gi|254780535|r   79 EMGGVDILVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNRFGRVINITSVVGFTG-----------  147 (247)
Q Consensus        79 ~~g~iDilVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~~G~IInisS~~~~~~-----------  147 (247)
T Consensus       111 ~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~  188 (314)
T KOG1208         111 KEGPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKA  188 (314)
T ss_pred             CCCCCCEEEECCCCCCCCC--CCCCCCHHHEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHCCCHHH
T ss_conf             1787658986552236765--45654411300023299999999999998537897679980653467665332362331


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf             --998577898899999999999999632285996343388179344228989999998539798885799999999997
Q gi|254780535|r  148 --NAGQVNYCAAKSGLTGFTKALAQETGRRNVTVNCVAPGFIGSDMTVNLTEDQKGKIISSIPMKRMGAVDDIAAAVLYL  225 (247)
Q Consensus       148 --~~~~~~Y~~sK~ai~~ltk~lA~e~~~~gIrvN~IaPG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL  225 (247)
T Consensus       189 ~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~  266 (314)
T KOG1208         189 KLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWPLTKSPEQGAATTCYA  266 (314)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCCC-CHHHHHHHHHHHHHHHCCCHHHHHHHEECH
T ss_conf             35550678888699899999999988554-9669986786121544003-207899999997667425888785314205


Q ss_pred             H-CHHHCCCCCCE
Q ss_conf             3-88878778868
Q gi|254780535|r  226 S-SLEASYVTGQT  237 (247)
Q Consensus       226 ~-S~~~~~itG~~  237 (247)
T Consensus       267 a~~p~~~~~sg~y  279 (314)
T KOG1208         267 ALSPELEGVSGKY  279 (314)
T ss_pred             HCCCCCCCCCCCC
T ss_conf             0276334766540