HHsearch alignment for GI: 254780535 and conserved domain: PRK10083

Probab=94.38  E-value=0.15  Score=30.13  Aligned_cols=162  Identities=17%  Similarity=0.166  Sum_probs=83.3

Q ss_pred             CCCCEEEEECCCCHHHHHHHHHHHH-CCCE-EEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf             8877899938998578999999998-8997-9999789899999999721389489998889999999999999999976
Q gi|254780535|r    4 LTGKKALVTGASGSIGLAIAKILYK-QGAS-VGLHGTSQEKLEKVAKNFDDVDRFLLFPANFSDRVSVEYLSKRVNEEMG   81 (247)
Q Consensus         4 l~~K~~lITG~~~GIG~~ia~~la~-~Ga~-V~i~~r~~~~l~~~~~~~~~~g~~~~~~~Dv~~~~~~~~~~~~~~~~~g   81 (247)
T Consensus       159 ~~g~~VlV~G~-G~iGl~~~~~~~~~~ga~~Vi~~d~~~~rl~~-A~~~GAd---~vi--~~~~-~~~~~~~~---~~G~  227 (339)
T PRK10083        159 TEQDVALIYGA-GPVGLTIVQVLKGVYGVKNVIVADRIDERLAL-AKESGAD---WVI--NNAQ-ESLAEALA---EKGV  227 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH-HHHCCCC---EEE--CCCC-CCHHHHHH---HCCC
T ss_conf             99988999587-65999999999985699789993798999999-9971998---998--4887-66999998---5399


Q ss_pred             CCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHHH
Q ss_conf             99899967898998875443999999999998899999999999999862998499947623388999857789889999
Q gi|254780535|r   82 GVDILVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNRFGRVINITSVVGFTGNAGQVNYCAAKSGL  161 (247)
Q Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~~G~IInisS~~~~~~~~~~~~Y~~sK~ai  161 (247)
T Consensus       228 ~~dvvid~~g~~----------~---------------~~~~a~~~~--~~gG~iv~~G~~----~~~~~i~--------  268 (339)
T PRK10083        228 KPTLIFDAACHP----------S---------------ILEEAVTLA--SPAARIVLMGFS----SEPSEIV--------  268 (339)
T ss_pred             CCCEEEECCCCH----------H---------------HHHHHHHHH--HCCEEEEEEECC----CCCCCCC--------
T ss_conf             961999666688----------9---------------999999985--188099999258----9987536--------


Q ss_pred             HHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCHHHHHHHHH-CCCCCCCC----CHHHHHHHHHHHHCHH
Q ss_conf             99999999996322859963433881793442289899999985-39798885----7999999999973888
Q gi|254780535|r  162 TGFTKALAQETGRRNVTVNCVAPGFIGSDMTVNLTEDQKGKIIS-SIPMKRMG----AVDDIAAAVLYLSSLE  229 (247)
Q Consensus       162 ~~ltk~lA~e~~~~gIrvN~IaPG~i~T~~~~~~~~~~~~~~~~-~~pl~R~~----~pedia~~v~fL~S~~  229 (247)
T Consensus       269 --~-----~~~~~k~l~i~gs---~~~~~----~~~~~~~li~~g~i~~~~lIt~~f~L~~~~~A~~~~~~~~  327 (339)
T PRK10083        269 --Q-----QGITGKELTIYSS---RLNAN----KFPVVIDWLAKGLIDPEKLITHTFDFQHVADAIELFEKDQ  327 (339)
T ss_pred             --H-----HHHHHCEEEEEEC---CCCHH----HHHHHHHHHHCCCCCHHHEEEEEEEHHHHHHHHHHHHCCC
T ss_conf             --8-----8874267899992---26888----9999999998599991570899989899999999986599