HHsearch alignment for GI: 254780535 and conserved domain: PRK11150
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional.
Probab=99.22 E-value=1.3e-08 Score=75.52 Aligned_cols=212 Identities=16% Similarity=0.242 Sum_probs=123.1
Q ss_pred EEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH--HHHCCCC
Q ss_conf 8999389985789999999988997-999978989999999972138948999888999999999999999--9976998
Q gi|254780535|r 8 KALVTGASGSIGLAIAKILYKQGAS-VGLHGTSQEKLEKVAKNFDDVDRFLLFPANFSDRVSVEYLSKRVN--EEMGGVD 84 (247)
Q Consensus 8 ~~lITG~~~GIG~~ia~~la~~Ga~-V~i~~r~~~~l~~~~~~~~~~g~~~~~~~Dv~~~~~~~~~~~~~~--~~~g~iD 84 (247)
T Consensus 1 ~ILVTGgaGFIGS~l~~~L~~~G~~~V~~~Dnl~~~-~~----~~~-----l~~~~~~d~~~~~~~~~~~~~~~~~~~id 70 (308)
T PRK11150 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG-TK----FVN-----LVDLDIADYMDKEDFLAQIMAGDDFGDIE 70 (308)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCC-CC----CCC-----CCCCCCCHHCCHHHHHHHHHHCCCCCCCC
T ss_conf 999940597999999999997799809999789997-31----301-----23563101203899999986113457876
Q ss_pred EEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCC-----------CCCCHH
Q ss_conf 999678989988754439999999999988999999999999998629984999476233889-----------998577
Q gi|254780535|r 85 ILVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNRFGRVINITSVVGFTG-----------NAGQVN 153 (247)
Q Consensus 85 ilVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~~G~IInisS~~~~~~-----------~~~~~~ 153 (247)
T Consensus 71 ~V~Hlaa~~~~~~~---~~---~~~~~~n~~~t~nll~~~----~~~~~-~~i~aSSs~vYG~~~~~~~~E~~~~~P~s~ 139 (308)
T PRK11150 71 AIFHEGACSSTTEW---DG---KYMMDNNYQYSKELLHYC----LEREI-PFLYASSAATYGGRTSDFIEEREYEKPLNV 139 (308)
T ss_pred EEEECCCCCCCCCC---CC---CHHHHHHHHHHHHHHHHH----HHCCC-CEEEECCHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf 89999866666455---65---113214999999999999----97499-889954756408988898656888998687
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--CCE-EEEECCCCCCCHHHHCCCHHHHHHHHHC-CC---------CCCCCCHHHHHH
Q ss_conf 8988999999999999996322--859-9634338817934422898999999853-97---------988857999999
Q gi|254780535|r 154 YCAAKSGLTGFTKALAQETGRR--NVT-VNCVAPGFIGSDMTVNLTEDQKGKIISS-IP---------MKRMGAVDDIAA 220 (247)
Q Consensus 154 Y~~sK~ai~~ltk~lA~e~~~~--gIr-vN~IaPG~i~T~~~~~~~~~~~~~~~~~-~p---------l~R~~~pedia~ 220 (247)
T Consensus 140 Yg~sK~~~E~~~~~~~~~~~~~~~~lR~fnvYGP~~~~~~~~~~v~~~~~~~~~~g~~~~~~~G~g~~~RDfiyV~Dv~~ 219 (308)
T PRK11150 140 YGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAA 219 (308)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEEEHHHHHH
T ss_conf 67609999999999999839982898762378959788887320799999999779997475399987884577899999
Q ss_pred HHHHHHCHHHCCCCCCEEEECCCE
Q ss_conf 999973888787788689968950
Q gi|254780535|r 221 AVLYLSSLEASYVTGQTIHVNGGM 244 (247)
Q Consensus 221 ~v~fL~S~~~~~itG~~i~vDGG~ 244 (247)
T Consensus 220 a~~~~~~--~-~~~g-v~NiGsg~ 239 (308)
T PRK11150 220 VNLWFLE--N-GVSG-IFNLGTGR 239 (308)
T ss_pred HHHHHHH--C-CCCC-EEEECCCC
T ss_conf 9999985--6-9987-49987999