HHsearch alignment for GI: 254780535 and conserved domain: TIGR01830
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase; InterPro: IPR011284 This entry represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis found in many plant and bacterial species. This enzyme is involved in type II fatty acid biosynthesis, where the individual metabolic transformations are carried out by different enzymes rather than by a single enzyme as occurs in type I fatty acid biosynthesis . Structural studies show that the enzyme is a tetramer which forms a typical Rossman fold , . Unlike other members of the short-chain dehydrogenase/reductase superfamily, the enzyme undergoes a marked conformational change upon binding of the NADP(H)cofactor. This conformational change aligns the side chains of the catalytic triad at the active site in an active conformation and increases the affinity of the enzyme for its substrate.; GO: 0004316 3-oxoacyl-[acyl-carrier-protein] reductase activity, 0051287 NAD binding, 0006633 fatty acid biosynthetic process.
Probab=100.00 E-value=0 Score=607.74 Aligned_cols=236 Identities=52% Similarity=0.782 Sum_probs=231.3
Q ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHHHHHCCC-CEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 9993899857899999999889979999789-899999999721389-48999888999999999999999997699899
Q gi|254780535|r 9 ALVTGASGSIGLAIAKILYKQGASVGLHGTS-QEKLEKVAKNFDDVD-RFLLFPANFSDRVSVEYLSKRVNEEMGGVDIL 86 (247)
Q Consensus 9 ~lITG~~~GIG~~ia~~la~~Ga~V~i~~r~-~~~l~~~~~~~~~~g-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil 86 (247)
T Consensus 1 AlVTGasRGIG~AIA~~LA~~Ga~V~i~y~~~e~~~~~~~~e~~~~G~~a~~~~~dvs~~~~~~~~~~~~~~~~G-iDiL 79 (238)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRTSEEGAEEVVEEIKELGVKAAGVVLDVSDREDVKALVEEAEEELG-IDIL 79 (238)
T ss_pred CEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-CEEE
T ss_conf 967167861679999999867995999659825788899999985697599996038888999999999999829-9089
Q ss_pred EECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 96789899887544399999999999889999999999999986299849994762338899985778988999999999
Q gi|254780535|r 87 VNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNRFGRVINITSVVGFTGNAGQVNYCAAKSGLTGFTK 166 (247)
Q Consensus 87 VnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~~G~IInisS~~~~~~~~~~~~Y~~sK~ai~~ltk 166 (247)
T Consensus 80 VNNAGITrD~Ll~RMk~edWd~Vi~~NL~g~F~~t~~v~~~M~K~R~GrIINisSVVG~~GN~GQaNYaASKAG~IGftK 159 (238)
T TIGR01830 80 VNNAGITRDNLLMRMKEEDWDAVINVNLKGVFNLTQAVLRPMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK 159 (238)
T ss_pred EECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 97874134301004885568999986126687888998898875067434861002000068742678888755899999
Q ss_pred HHHHHHHHHCCEEEEECCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCEEEECCCEE
Q ss_conf 9999963228599634338817934422898999999853979888579999999999738887877886899689504
Q gi|254780535|r 167 ALAQETGRRNVTVNCVAPGFIGSDMTVNLTEDQKGKIISSIPMKRMGAVDDIAAAVLYLSSLEASYVTGQTIHVNGGMA 245 (247)
Q Consensus 167 ~lA~e~~~~gIrvN~IaPG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~~~~itG~~i~vDGG~~ 245 (247)
T Consensus 160 SlAkElasRnItVNaVAPGFI~TdMT~~L~e~~~~~~l~~IPLgR~G~pEeVA~~v~FLASd~AsYITGqv~~VdGGm~ 238 (238)
T TIGR01830 160 SLAKELASRNITVNAVAPGFIETDMTDKLSEKVKKAMLSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGGMV 238 (238)
T ss_pred HHHHHCCCCCCEEEEECCCCCCCCCCHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCC
T ss_conf 9998603687058887489989700021698899999852772326776569999997325124742551663068789