HHsearch alignment for GI: 254780535 and conserved domain: pfam02719
>pfam02719 Polysacc_synt_2 Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI).
Probab=99.75 E-value=9.1e-16 Score=121.53 Aligned_cols=217 Identities=17% Similarity=0.196 Sum_probs=163.4
Q ss_pred EEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 99938998578999999998899-799997898999999997213---89489998889999999999999999976998
Q gi|254780535|r 9 ALVTGASGSIGLAIAKILYKQGA-SVGLHGTSQEKLEKVAKNFDD---VDRFLLFPANFSDRVSVEYLSKRVNEEMGGVD 84 (247)
Q Consensus 9 ~lITG~~~GIG~~ia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~---~g~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD 84 (247)
T Consensus 1 ILVTGGaGFIGS~Lv~~Ll~~g~~~v~v~d~~~~~~~~~~~~l~~~~~~~~~~~~~~DI~D~~~l~~~~~~----~-~~D 75 (280)
T pfam02719 1 VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIEQELREEYNDPKLRFFIGDVRDRERLERAMEE----Y-GVD 75 (280)
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH----C-CCC
T ss_conf 79974886799999999996899889999088742778999988626789838998116898999999875----4-999
Q ss_pred EEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99967898998875443999999999998899999999999999862998499947623388999857789889999999
Q gi|254780535|r 85 ILVNNAGIVRDSLFMRARYEDWDDVLSVNLTSAFLLTRQLVPLMIRNRFGRVINITSVVGFTGNAGQVNYCAAKSGLTGF 164 (247)
Q Consensus 85 ilVnnAg~~~~~~~~~~~~~~w~~~~~~Nl~~~~~~~~~~~~~m~~~~~G~IInisS~~~~~~~~~~~~Y~~sK~ai~~l 164 (247)
T Consensus 76 ~V~HlAA~~~V~----~s~~~P~~~~~~Nv~gT~nlLe~a~----~~~vk~~v~~STd~a~~P---~s~Yg~sK~~~E~l 144 (280)
T pfam02719 76 TVFHAAALKHVP----LVEYNPMEAIKTNVLGTENVAEAAI----ENGVEKFVLISTDKAVNP---TNVMGATKRLAEKL 144 (280)
T ss_pred EEEECHHHCCCC----CHHHCHHHHHHHHHHHHHHHHHHHH----HCCCCEEECCCCCCCCCC---CCCCCCCHHHHHHH
T ss_conf 999810311653----2766999999887277799998888----539624551476644569---98454237778999
Q ss_pred HHHHHHHHHHHCCEEEEECCCCCCCHHHHCCCHHHHHHHHHCCCC--------CCCCCHHHHHHHHHHHHCHHHCCCCCC
Q ss_conf 999999963228599634338817934422898999999853979--------888579999999999738887877886
Q gi|254780535|r 165 TKALAQETGRRNVTVNCVAPGFIGSDMTVNLTEDQKGKIISSIPM--------KRMGAVDDIAAAVLYLSSLEASYVTGQ 236 (247)
Q Consensus 165 tk~lA~e~~~~gIrvN~IaPG~i~T~~~~~~~~~~~~~~~~~~pl--------~R~~~pedia~~v~fL~S~~~~~itG~ 236 (247)
T Consensus 145 ~~~y~~~~~~~~~~~~~lR~fNVyGpr-gsVIp~Fi~~~~~~~pi~I~dg~qtRdf~~V~D~v~~~l~a~~~---~~~ge 220 (280)
T pfam02719 145 FQAANRESGSGKTRFSAVRFGNVLGSR-GSVIPLFKKQIAEGGPVTVTHPDMTRFFMTIPEAVQLVLQAGAM---GKGGE 220 (280)
T ss_pred HHHHHHHHCCCCCEEEEEEECCEECCC-CCCHHHHHHHHHCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHH---CCCCC
T ss_conf 999999719998548987544502899-77099999999859986565998438558799999999999972---87786
Q ss_pred EEEECCCEE
Q ss_conf 899689504
Q gi|254780535|r 237 TIHVNGGMA 245 (247)
Q Consensus 237 ~i~vDGG~~ 245 (247)
T Consensus 221 ifnig~g~~ 229 (280)
T pfam02719 221 IFVLDMGEP 229 (280)
T ss_pred EEECCCCCC
T ss_conf 788889986