HHSEARCH alignment of GI: 254780536 and SCOP domain: d1mlaa1

Alignment
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=443.35  Aligned_cols=234  Identities=40%  Similarity=0.631  Sum_probs=223.4

Q ss_pred             EEEEECCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHC-C
Q ss_conf             199980873337311589999859999999999998839897898538986783046765034566665478999971-8
Q gi|254780536|r    2 STVLTFPGQGSQVIGMGRDLYDSFPEARLVFEEVDHTLNQNLSDLMWNGSQEELTATCNAQPALTAVSMAFIRVMEKN-G   80 (314)
Q Consensus         2 k~~f~FpGQGsq~~gM~~~L~~~~p~~r~~~~~~~~~l~~~l~~~~~~~~~~~l~~~~~~Qp~i~~~~~a~~~~l~~~-g   80 (314)
                      ++||+||||||||+|||++||+++|.||+.++++++++++++.+.++..+.+.+++|.++||+||+++++++++|+++ |
T Consensus         1 q~AfvFpGQGsQ~~gMg~~L~~~~p~~r~~~~~~~~~l~~~l~~~~~~~~~~~~~~t~~~qpai~~~~~al~~~l~~~~g   80 (235)
T d1mlaa1           1 QFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGG   80 (235)
T ss_dssp             CEEEEECCTTCCCTTTTHHHHHHCHHHHHHHHHHHHHHTSCHHHHHHHCCHHHHTSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             98999578055188889999977999999999999985987899972476434520799999999999999999998339


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf             87643544246654420122253178650233333456886531001111222221235035531122344211354200
Q gi|254780536|r   81 LCVKRDISYVAGHSLGEYTALCAAKAFSLSDTIRLVRARGKSMQEAVPPGLGSMVAIIGLDDCVVDSICAQASRVGICEI  160 (314)
Q Consensus        81 i~~~~~p~~v~GhSlGE~aAl~~aG~ls~eda~~lv~~R~~~m~~~~~~~~g~M~aV~~~~~~~~~~~~~~~~~~~~~~i  160 (314)
                      +    +|++++|||+|||+|+++||++|++|+++++..||++|+++.+                                
T Consensus        81 ~----~p~~v~GhSlGE~aAl~~aG~ls~e~~~~lv~~Rg~~m~~~~~--------------------------------  124 (235)
T d1mlaa1          81 K----APAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEAVP--------------------------------  124 (235)
T ss_dssp             C----CCSEEEESTHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHSC--------------------------------
T ss_pred             C----CCEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC--------------------------------
T ss_conf             9----7346540331289999975875300089999998888887079--------------------------------


Q ss_pred             CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             12232221353033112899988888865310035555432342010203788887422232028776542045787100
Q gi|254780536|r  161 ANDNGGGQVVISGLQDAVKCAADTCLNKGAKRAVFLPVSAPFHSSLMTPVSKVMKWMLDSVTKQDPVVPILPNFCASPVS  240 (314)
Q Consensus       161 a~~Ns~~q~visG~~~~l~~~~~~~~~~~~~~~~~L~v~~afHs~lm~~~~~~~~~~l~~i~~~~p~ipi~S~~~g~~~~  240 (314)
                                                            ..|||||+|+++.++|++.++++++++|++|+|||+||++++
T Consensus       125 --------------------------------------~~pfHs~~m~~~~~~~~~~l~~v~~~~p~~pviS~~tg~~~~  166 (235)
T d1mlaa1         125 --------------------------------------EVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCET  166 (235)
T ss_dssp             --------------------------------------TSCTTSGGGHHHHHHHHHHHHTSCCCCCSSCBBCTTTCCBCC
T ss_pred             --------------------------------------CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCC
T ss_conf             --------------------------------------775223776501899999985688889963488578777788


Q ss_pred             CCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEECCCHHHHHHHH
Q ss_conf             100233222220448501999999999779989999389879999999873898155239989999999
Q gi|254780536|r  241 SIDEISRLLVEQVTGRVRWRETIQWFANHGVKSVYEVGSGKVLTGLAKRIDKSLSAVSISKVEDIDLAL  309 (314)
Q Consensus       241 ~~~~~~~~l~~ql~~pV~f~~~i~~l~~~g~~~fiEiGP~~~Lt~l~~~~~~~~~~~~~~~~~~~~~~l  309 (314)
                      +.+.++++|++|+++||+|.++|+++.+.|+++|||+|||++|++++|+++++.++.+++++++++.+|
T Consensus       167 ~~~~~~~~l~~ql~~pV~f~~~i~~l~~~g~~~fiEiGP~~~Lt~l~~~i~~~~~~~~v~~~~~l~~al  235 (235)
T d1mlaa1         167 NGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVGPGKVLTGLTKRIVDTLTASALNEPSAMAAAL  235 (235)
T ss_dssp             SHHHHHHHHHHHHHSCEEHHHHHHHHHHTTCCEEEECSSSSHHHHHHHHHCTTCEEEECCSHHHHHHHC
T ss_pred             CHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCEECCCHHHHHHHC
T ss_conf             989999999874028766999999999789999999398688899999980788830059989999759


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: FabD/lysophospholipase-like
superfamily: FabD/lysophospholipase-like
family: FabD-like
domain: Catalytic domain of malonyl-CoA ACP transacylase FabD
species: Escherichia coli [TaxId: 562]