PSIBLAST alignment of GI: 254780536 and protein with PDB id: 1nm2

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 84/315 (26%), Positives = 128/315 (40%), Gaps = 11/315 (3%)

Query: 4   VLTFPGQGSQVIGMGRDLYDSFPEARLVFEEVDHTLNQNLSDLMWNGSQEELTATCNAQP 63
           VL  PGQG+Q  G   D   + P A          +  +L+        +E+  T  AQP
Sbjct: 4   VLVAPGQGAQTPGFLTDWL-ALPGAADRVAAWSDAIGLDLAHFGTKADADEIRDTSVAQP 62

Query: 64  ALTAVSMAFIRVM-----EKNGLCVKRDISYVAGHSLGEYTALCAAKAFSLSDTIRLVRA 118
            L A  +     +       +          VAGHS+GE TA   A     +  + LVR 
Sbjct: 63  LLVAAGILSAAALGTQTSVADATGPGFTPGAVAGHSVGEITAAVFAGVLDDTAALSLVRR 122

Query: 119 RGKSMQEAVPPGLGSMVAIIGLDDCVVDSICAQASRVGICEIANDNGGGQVVISGLQDAV 178
           RG +M EA       M A++G D  V       A    +     +  G   +++      
Sbjct: 123 RGLAMAEAAAVTETGMSALLGGDPEVSV-----AHLERLGLTPANVNGAGQIVAAGTMEQ 177

Query: 179 KCAADTCLNKGAKRAVFLPVSAPFHSSLMTPVSKVMKWMLDSVTKQDPVVPILPNFCASP 238
             A +    +G ++ V L V+  FH+  M P    +     ++T  DP V  + N     
Sbjct: 178 LAALNEDKPEGVRKVVPLKVAGAFHTRHMAPAVDKLAEAAKALTPADPKVTYVSNKDGRA 237

Query: 239 VSSIDEISRLLVEQVTGRVRWRETIQWFANHGVKSVYEVGSGKVLTGLAKRIDKSLSAVS 298
           V+S  E+   LV QV   VRW   ++ F   GV ++ EV  G  LTGLAKR    +  ++
Sbjct: 238 VASGTEVLDRLVGQVANPVRWDLCMETFKELGVTAIIEVCPGGTLTGLAKRALPGVKTLA 297

Query: 299 ISKVEDIDLALRSIV 313
           +   +D+D A   + 
Sbjct: 298 LKTPDDLDAARELVA 312