HHsearch alignment for GI: 254780537 and conserved domain: pfam00148
>pfam00148 Oxidored_nitro Nitrogenase component 1 type Oxidoreductase.
Probab=94.94 E-value=0.36 Score=28.25 Aligned_cols=151 Identities=10% Similarity=0.112 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCH----HHHHHCCC
Q ss_conf 21356789999999998643188899999989986301455337899886307844736998266521----45775297
Q gi|254780537|r 128 MSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEKVDPEKRWFVTSEGCLV----YLAEDFGF 203 (294)
Q Consensus 128 ldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~~p~~~~~~v~~H~af~----Y~~~~yGl 203 (294)
T Consensus 227 ~G~~~T~~~l~~i~~~~g~~~--~~~~i~~e~~~~~~~~~~----~~~~l~----gkrv~v~g~~~~~~~l~~~L~ElG~ 296 (398)
T pfam00148 227 IGIEATDRFLRALAELLGKEV--APEVIAEERGRLLDALAD----YHEYLA----GKRVAIYGDPDLAWGLARFLEELGM 296 (398)
T ss_pred CCHHHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHHHHH----HHHHHC----CCEEEEECCCHHHHHHHHHHHHCCC
T ss_conf 777899999999999968998--778999999999999999----988737----9779998884579999999998799
Q ss_pred EEEEECCCCCCCCC--C-------------HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEE--EECC
Q ss_conf 28872268864000--7-------------89999999762016971899827899799999999829934443--2012
Q gi|254780537|r 204 KSLYLWPINSDSER--S-------------PSMMRHAINQMRSHKIKFIFSESTNSDQPAKQVAYETNASYGGV--LYVD 266 (294)
Q Consensus 204 ~~~~~~~~~~~~ep--s-------------~~~l~~~~~~ik~~~v~~if~e~~~~~~~~~~ia~e~~~~~~~~--~~~d 266 (294)
T Consensus 297 ~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~d~~e~~~~i~~~~pDliig~s-----~~~~~a~~~~ip~i~~~~P~~~ 371 (398)
T pfam00148 297 EVVAVGTGTGHPDDYERLKALLDGTLRVIDDADLEELEELIKELKPDLLIGNS-----KERYLAKKLGIPLVRIGFPIHD 371 (398)
T ss_pred EEEEEEECCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCEEEECH-----HHHHHHHHCCCCEEEEECCEEE
T ss_conf 79999967898788998998547897799779999999998726999999891-----7899999739988982278056
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 3787778868999999999999986209
Q gi|254780537|r 267 SLSKPDGPAPTYLDLLRFSLTKIVDTLF 294 (294)
Q Consensus 267 ~l~~~~~~~~~Y~~~m~~N~~~l~~aL~ 294 (294)
T Consensus 372 ~~~~~~~p~~Gy~G~~-~l~~~i~n~l~ 398 (398)
T pfam00148 372 RNGLHRRPYVGYEGAL-NLADEIANALL 398 (398)
T ss_pred EECCCCCCEEEHHHHH-HHHHHHHHHHC
T ss_conf 8667788606087599-99999998629