HHsearch alignment of GI: 254780537 and MMDB domain: 1toa_A_1-195

>1toa_A (A:1-195) Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC transporter; 1.80A {Treponema pallidum}
Probab=100.00  E-value=2.9e-40  Score=291.71  Aligned_cols=161  Identities=24%  Similarity=0.403  Sum_probs=145.2

Q ss_pred             CCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf             35882899975289999998518914899962688980120227124577603789999887610689999974235575
Q gi|254780537|r   20 TTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTK   99 (294)
Q Consensus        20 ~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~   99 (294)
                      .+++++||||++|++++|++|+||+++|++|+|+|.|||+|||+|+|++++++||++||||.++|+|+.++..+......
T Consensus        35 ~~~~~~Vvts~~p~~~~v~~I~gd~~~V~~l~~~~~dpH~y~p~p~d~~~l~~aDl~v~~G~~~e~~~~~~~~~~~~~~~  114 (195)
T 1toa_A           35 ADGKPLVVTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWLGNADLILYNGLHLETKMGEVFSKLRGSRL  114 (195)
T ss_dssp             --CCCEEEESSHHHHHHHHHHHGGGSEEEESCCTTCCTTTCCCCHHHHHHHHHCSEEEECCTTCSTTCHHHHHHHTTSSE
T ss_pred             CCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf             06996799988699999999808825899805979796568689999999955999999289877477999986457776


Q ss_pred             CCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf             21112374202221001233463011122135678999999999864318889999998998630145533789988630
Q gi|254780537|r  100 IITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEK  179 (294)
Q Consensus       100 ~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~  179 (294)
                      ++.....  .....+++++++..|||+|+||.|++.++++|++.|+++||+++++|++|+++|.++|++|+++++.++++
T Consensus       115 ~~~~~~~--~~~~~~~~~~~~~~dpH~W~~p~~~~~~a~~i~~~L~~ldP~~~~~y~~n~~~~~~~l~~l~~~~~~~l~~  192 (195)
T 1toa_A          115 VVAVSET--IPVSQRLSLEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQS  192 (195)
T ss_dssp             EEEGGGG--SCGGGSCBSTTSCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCC--CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             5201444--23211235442223420230733689999999999998767667788778999999999987899999875


Q ss_pred             CCC
Q ss_conf             784
Q gi|254780537|r  180 VDP  182 (294)
Q Consensus       180 ~p~  182 (294)
                      +|.
T Consensus       193 iPa  195 (195)
T 1toa_A          193 LPA  195 (195)
T ss_dssp             SCG
T ss_pred             HHC
T ss_conf             303