HHsearch alignment of GI: 254780537 and MMDB domain: 1toa_A_1-195
>1toa_A (A:1-195) Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC transporter; 1.80A {Treponema pallidum}
Probab=100.00 E-value=2.9e-40 Score=291.71 Aligned_cols=161 Identities=24% Similarity=0.403 Sum_probs=145.2
Q ss_pred CCCCCEEEEECHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 35882899975289999998518914899962688980120227124577603789999887610689999974235575
Q gi|254780537|r 20 TTQKKVVLSSFSIIGDITQNIAKDLVTVTTLVEAGNDSHSYQVTSADAIKIQNADLILCNGLHLEETYMKYFTNLKKGTK 99 (294)
Q Consensus 20 ~~~~~~Vv~s~~pl~~iv~~I~gd~v~V~~li~~g~dpH~ye~tp~d~~~i~~Adliv~~G~~~E~~~~~~~~~~~~~~~ 99 (294)
.+++++||||++|++++|++|+||+++|++|+|+|.|||+|||+|+|++++++||++||||.++|+|+.++..+......
T Consensus 35 ~~~~~~Vvts~~p~~~~v~~I~gd~~~V~~l~~~~~dpH~y~p~p~d~~~l~~aDl~v~~G~~~e~~~~~~~~~~~~~~~ 114 (195)
T 1toa_A 35 ADGKPLVVTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGDVEWLGNADLILYNGLHLETKMGEVFSKLRGSRL 114 (195)
T ss_dssp --CCCEEEESSHHHHHHHHHHHGGGSEEEESCCTTCCTTTCCCCHHHHHHHHHCSEEEECCTTCSTTCHHHHHHHTTSSE
T ss_pred CCCCCEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 06996799988699999999808825899805979796568689999999955999999289877477999986457776
Q ss_pred CCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf 21112374202221001233463011122135678999999999864318889999998998630145533789988630
Q gi|254780537|r 100 IITVTDGINPIGVSEDTSVDSEPNPHAWMSLTNAMIYIENIRKALTALDPSNAKKYELNAREYSEKIRNSILPLKTRIEK 179 (294)
Q Consensus 100 ~i~~~~~i~~~~~~~~~~~~~~~dpH~Wldp~~~~~~a~~I~~~L~~~dP~~~~~y~~N~~~~~~~l~~l~~~~~~~~~~ 179 (294)
++..... .....+++++++..|||+|+||.|++.++++|++.|+++||+++++|++|+++|.++|++|+++++.++++
T Consensus 115 ~~~~~~~--~~~~~~~~~~~~~~dpH~W~~p~~~~~~a~~i~~~L~~ldP~~~~~y~~n~~~~~~~l~~l~~~~~~~l~~ 192 (195)
T 1toa_A 115 VVAVSET--IPVSQRLSLEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQS 192 (195)
T ss_dssp EEEGGGG--SCGGGSCBSTTSCBCCCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCC--CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5201444--23211235442223420230733689999999999998767667788778999999999987899999875
Q ss_pred CCC
Q ss_conf 784
Q gi|254780537|r 180 VDP 182 (294)
Q Consensus 180 ~p~ 182 (294)
+|.
T Consensus 193 iPa 195 (195)
T 1toa_A 193 LPA 195 (195)
T ss_dssp SCG
T ss_pred HHC
T ss_conf 303