RPSBLAST alignment for GI: 254780538 and conserved domain: TIGR03269

>gnl|CDD|132313 TIGR03269, met_CoM_red_A2, methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2. Length = 520

 Score = 54.0 bits (130), Expect = 4e-08
 Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 67/228 (29%)

Query: 27  ALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISIFNQTVENALKADLIA 86
           A+++V+L + E  I  ++G +GAGK+TL + I G++    G +        N    D   
Sbjct: 299 AVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEV--------NVRVGD--- 347

Query: 87  YIPQTESIDWTFPILVEDVVMMGRYK------HMNW-----RRVASNNDYRIVTEA---- 131
                E +D T P         GR K      H  +     R V  N     +TEA    
Sbjct: 348 -----EWVDMTKP----GPDGRGRAKRYIGILHQEYDLYPHRTVLDN-----LTEAIGLE 393

Query: 132 -------------LENVGMSSMRQRQI-----GELSIGQQKRVFLARALAQKSQVIIMDE 173
                        L+ VG    +  +I      ELS G++ RV LA+ L ++ +++I+DE
Sbjct: 394 LPDELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDE 453

Query: 174 PFAAIDFKTEREMIFLLKSLLN-----EDIMILVSTHNINSIPSFCDR 216
           P   +D  T+ ++     S+L      E   I+VS H+++ +   CDR
Sbjct: 454 PTGTMDPITKVDVT---HSILKAREEMEQTFIIVS-HDMDFVLDVCDR 497