RPSBLAST alignment for GI: 254780538 and conserved domain: TIGR01189
>gnl|CDD|162243 TIGR01189, ccmA, heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c. Length = 198
Score = 78.2 bits (193), Expect = 2e-15
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 50/185 (27%)
Query: 42 ALIGLNGAGKSTLFQAIMGLIPLDKGSISIFNQTVEN-----------------ALKADL 84
+ G NG GK+TL + + GL+ D G + +N T LK +L
Sbjct: 30 QVTGPNGIGKTTLLRILAGLLRPDSGEV-RWNGTALAEQRDEPHRNILYLGHLPGLKPEL 88
Query: 85 IAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVASNNDYRIVTEALENVGMSSMRQRQ 144
A E++ + W + R + +AL VG++
Sbjct: 89 SA----LENLHF-------------------WAAIHGGAQ-RTIEDALAAVGLTGFEDLP 124
Query: 145 IGELSIGQQKRVFLARALAQKSQVIIMDEPFAAIDFKTEREMIFLLKSLLNEDI----MI 200
+LS GQQ+R+ LAR ++ + I+DEP A+D + + LL LL + ++
Sbjct: 125 AAQLSAGQQRRLALARLWLSRAPLWILDEPTTALD----KAGVALLAGLLRAHLARGGIV 180
Query: 201 LVSTH 205
L++TH
Sbjct: 181 LLTTH 185