RPSBLAST alignment for GI: 254780538 and conserved domain: TIGR03411
>gnl|CDD|163251 TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. Length = 242
Score = 79.5 bits (197), Expect = 9e-16
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 31/232 (13%)
Query: 12 LELKDISVTYPNGYCALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISI 71
L L+ +SV++ +G+ AL D++L++ + +IG NGAGK+T+ I G D+GS+ +
Sbjct: 3 LYLEGLSVSF-DGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSV-L 60
Query: 72 FNQTVENALKADLIAYIP-----QTESIDWTFPIL-VEDVVMM------GRYKHMNWRRV 119
F T L IA Q ++ F L V + + + + + +R
Sbjct: 61 FGGTDLTGLPEHQIARAGIGRKFQKPTV---FENLTVFENLELALPRDKSVFASLFFRLS 117
Query: 120 ASNNDYRIVTEALENVGMSSMRQRQIGELSIGQQKRVFLARALAQKSQVIIMDEPFAAID 179
A D + E LE +G++ R G LS GQ++ + + L Q +++++DEP A +
Sbjct: 118 AEEKD--RIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGM- 174
Query: 180 FKTEREMIF---LLKSLLNEDIMILVSTHNINSIPSFCDRTIFLKKTVLASG 228
T+ E LLKSL + +++V H++ + R+I K TVL G
Sbjct: 175 --TDEETEKTAELLKSLAGKHSVVVVE-HDMEFV-----RSIADKVTVLHQG 218