RPSBLAST alignment for GI: 254780538 and conserved domain: TIGR03719
>gnl|CDD|163431 TIGR03719, ABC_ABC_ChvD, ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown. Length = 552
Score = 45.7 bits (109), Expect = 1e-05
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 45/194 (23%)
Query: 14 LKDISVTYPNGYCALEDVNL-FIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISIF 72
+ +S P L+D++L F P I ++GLNGAGKSTL + + G +DK
Sbjct: 7 MNRVSKVVPPKKEILKDISLSFFPGAKI-GVLGLNGAGKSTLLRIMAG---VDKEFNG-- 60
Query: 73 NQTVENALKADL-IAYIPQTESIDWTFPILVEDVVMMG---------RYKHMNWRRVASN 122
E + + Y+PQ +D T V + V G R+ ++ + +
Sbjct: 61 ----EARPAPGIKVGYLPQEPQLDPT--KTVRENVEEGVAEIKDALDRFNEISAKFAEPD 114
Query: 123 NDYRIVTE---ALEN---------------VGMSSMR----QRQIGELSIGQQKRVFLAR 160
D + L+ + M ++R + +LS G+++RV L R
Sbjct: 115 ADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPPWDADVTKLSGGERRRVALCR 174
Query: 161 ALAQKSQVIIMDEP 174
L K ++++DEP
Sbjct: 175 LLLSKPDMLLLDEP 188