RPSBLAST alignment for GI: 254780538 and conserved domain: COG4988
>gnl|CDD|34593 COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]. Length = 559
Score = 117 bits (294), Expect = 4e-27
Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 31/248 (12%)
Query: 12 LELKDISVTYPNGYCALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISI 71
+ L+++S YP+G AL D+NL I +TAL+G +GAGKSTL ++G + +G I +
Sbjct: 321 ISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRV 380
Query: 72 FNQTVENALKADL---IAYIPQTESIDWTFPILVEDVVMMGRYKHMNWRRVASNNDYRIV 128
+ + I+++ Q + F + + +++ R AS+ + +
Sbjct: 381 NGIDLRDLSPEAWRKQISWVSQNPYL---FAGTIRENILLARPD-------ASDEE---I 427
Query: 129 TEALENVGMSSMRQR------QIGE----LSIGQQKRVFLARALAQKSQVIIMDEPFAAI 178
AL+ G+ + IGE LS GQ +R+ LARAL + ++++DEP A +
Sbjct: 428 IAALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHL 487
Query: 179 DFKTEREMIFLLKSLLNEDIMILVSTHNINSIPSFCDRTIFLKKTVLASGLTSDIFNEDN 238
D +TE+ ++ L+ L + ++++ TH + DR + L L E +
Sbjct: 488 DAETEQIILQALQELAKQKTVLVI-THRLEDAAD-ADRIVVLDNGRLVE---QGTHEELS 542
Query: 239 IQKTFGAQ 246
++ A
Sbjct: 543 EKQGLYAN 550