RPSBLAST alignment for GI: 254780538 and conserved domain: cd03237

>gnl|CDD|72996 cd03237, ABC_RNaseL_inhibitor_domain2, The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 246

 Score = 63.4 bits (154), Expect = 7e-11
 Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 28/189 (14%)

Query: 35  IPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISIFNQTVENALKADLIAYIPQTESI 94
           I E+ +  ++G NG GK+T  + + G++  D+G I I   TV         +Y PQ    
Sbjct: 22  ISESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDIEIELDTV---------SYKPQYIKA 72

Query: 95  DWTFPILVEDVVM---MGRYKHMNWRRVASNNDYRIVTEALENVGMSSMRQRQIGELSIG 151
           D  +   V D++       Y H  ++           TE  + + +  +  R++ ELS G
Sbjct: 73  D--YEGTVRDLLSSITKDFYTHPYFK-----------TEIAKPLQIEQILDREVPELSGG 119

Query: 152 QQKRVFLARALAQKSQVIIMDEPFAAIDFKTEREMI--FLLKSLLNEDIMILVSTHNINS 209
           + +RV +A  L++ + + ++DEP A +D + +R M    + +   N +    V  H+I  
Sbjct: 120 ELQRVAIAACLSKDADIYLLDEPSAYLDVE-QRLMASKVIRRFAENNEKTAFVVEHDIIM 178

Query: 210 IPSFCDRTI 218
           I    DR I
Sbjct: 179 IDYLADRLI 187