RPSBLAST alignment for GI: 254780538 and conserved domain: cd03294
>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
Score = 99.9 bits (249), Expect = 8e-22
Identities = 64/213 (30%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
Query: 27 ALEDVNLFIPENTITALIGLNGAGKSTLFQAIMGLIPLDKGSISIFNQTVENALKADLIA 86
+ DV+L + E I ++GL+G+GKSTL + I LI G + I Q + + +L
Sbjct: 39 GVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRE 98
Query: 87 YIPQTESIDW-TFPILVEDVVMMGRYKHMNWRRVASNNDYRIVTEALENVGMSSMRQRQI 145
+ S+ + +F +L V+ + + V EALE VG+ +
Sbjct: 99 LRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP 158
Query: 146 GELSIGQQKRVFLARALAQKSQVIIMDEPFAAIDFKTEREMIFLLKSLLNE-DIMILVST 204
ELS G Q+RV LARALA +++MDE F+A+D REM L L E I+ T
Sbjct: 159 DELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFIT 218
Query: 205 HNINSIPSFCDRTIFLKK-TVLASGLTSDIFNE 236
H+++ DR +K ++ G +I
Sbjct: 219 HDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251