HHsearch alignment for GI: 254780539 and conserved domain: COG4139

>COG4139 BtuC ABC-type cobalamin transport system, permease component [Coenzyme metabolism].
Probab=98.83  E-value=1.2e-07  Score=61.51  Aligned_cols=223  Identities=12%  Similarity=0.138  Sum_probs=159.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHCC--CC----HHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999987779999996589963248999999999--------998314--41----456899999999999986
Q gi|254780539|r   17 AIWMSTLIGCVCGLLSAYLILKGWSSIGNGISHAIFPGIV--------VCHRLN--IP----LSVGATISGMLATGIMVK   82 (273)
Q Consensus        17 all~~~li~~~~~~lG~~~v~r~~s~~~~alsH~~l~Gia--------la~~l~--~~----~~~ga~~~~ll~~~li~~   82 (273)
T Consensus        59 R~lAv~~vGAsLAVsGAvm----QaL~~N~LAEPGllGVs~GA~Valv~~vL~~~~l~~~~a~~~~Ai~GALl~TliLl~  134 (326)
T COG4139          59 RTLAVLLVGAALAVSGAVM----QALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLCAIAGALIITLILLR  134 (326)
T ss_pred             HHHHHHHHHHHHHHHHHHH----HHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8899999727888708999----999658666876343158840999999997477575899999999999999999999


Q ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHHHH---H---HHCCC---CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3102465115689999999999999975---2---11022---2421121153100270001357887679999999988
Q gi|254780539|r   83 IKETTKLREDVAIAVVYIIFYSFAMFML---S---LSPSA---VYVENIFLGNTLSMSRSDTIQVLIITFSVACIVYMKW  153 (273)
Q Consensus        83 l~~~~~~~~d~~igi~~~~~~algvlli---s---~~~~~---~~l~~~LfG~il~i~~~di~~~~~~~~i~~~~~~~~~  153 (273)
T Consensus       135 ~aRr~~lT-----arLLLvGVALGIi~~A~mTWA~YFS~sL~LRQLMYWmMG~~~GVdW~Q~~L~La-~~PvvIWl~~Qg  208 (326)
T COG4139         135 FARRHLST-----SRLLLAGVALGIICSALMTWAIYFSTSLDLRQLMYWMMGGFGGVDWRQSWLMLA-LIPVLIWICCQS  208 (326)
T ss_pred             HHHHHHHH-----HHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHH-HHHHHHHHHCCC
T ss_conf             99999989-----899999999999888785620031065269999999967756742999989999-977888610167


Q ss_pred             HHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf             87888724688998717871046779999999999999999899999999999999998520898999999999999999
Q gi|254780539|r  154 KDFVLLFFDERHAHSVGINVKLLKMLFFSLLTITIVIGFQTVGILLVIATVITPGATAKLMSKSFGTYLVSSSLLGATSS  233 (273)
Q Consensus       154 r~l~~~sfD~~~A~~~Gi~v~~~~~l~l~l~al~v~~~v~~vG~llv~allv~Paa~A~~~~~~~~~~~~~s~~~g~~~~  233 (273)
T Consensus       209 ~vLn~l~LGE~~ArQLG~~lh~~R~~LvLAi~llVG~SVAL~GvIgFiGL-ViPHiLRLt~~td~RlLLp~~Al~Ga~~L  287 (326)
T COG4139         209 RPLNMLALGEISARQLGLPLWFWRNVLVLATGWMVGVSVALAGAIGFIGL-VIPHILRLCGLTDHRLLLPGCALAGASAL  287 (326)
T ss_pred             CCCHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCCCCHHHHCCHHH
T ss_conf             63147762514688729718999999999999998689997527767667-68899998357423201251465032799


Q ss_pred             HHHHHHHHH----HCCCCHHH
Q ss_conf             999999999----57981899
Q gi|254780539|r  234 FLGSYISYF----LDCSPGGI  250 (273)
Q Consensus       234 ~~G~~lS~~----~~lp~g~~  250 (273)
T Consensus       288 l~AD~vARlaL~S~ELPiGVV  308 (326)
T COG4139         288 LLADIVARLALASAELPIGVV  308 (326)
T ss_pred             HHHHHHHHHHHCCCCCCCEEE
T ss_conf             999999998712367773268