HHsearch alignment for GI: 254780539 and conserved domain: PRK03784
>PRK03784 vtamin B12-transporter permease; Provisional.
Probab=99.92 E-value=1.5e-21 Score=140.34 Aligned_cols=247 Identities=15% Similarity=0.163 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHCCC------CHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999877799999965899632489--------999999999983144------14568999999999999863
Q gi|254780539|r 18 IWMSTLIGCVCGLLSAYLILKGWSSIGNGIS--------HAIFPGIVVCHRLNI------PLSVGATISGMLATGIMVKI 83 (273)
Q Consensus 18 ll~~~li~~~~~~lG~~~v~r~~s~~~~als--------H~~l~Giala~~l~~------~~~~ga~~~~ll~~~li~~l 83 (273)
T Consensus 61 ~l~a~l~Ga~LavsG~ll----Q~l~rNpLA~P~iLGissGA~l~~~~~~~~~~~~~~~~~~~~~a~~gal~~~~l~~~~ 136 (330)
T PRK03784 61 TLAVLLVGAALAVSGAVM----QALFENPLAEPGLLGVSNGAGVALVAAVLLGQGLLPGWALSLCAIAGALIITLILLRF 136 (330)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999----9994798889850358899999999999998767779999999999999999999999
Q ss_pred HCCCCCCHH--HHHHHHHHHHHHHHHH-HHHHHCC-C-CCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 102465115--6899999999999999-7521102-2-242112115310027000135788767999999998887888
Q gi|254780539|r 84 KETTKLRED--VAIAVVYIIFYSFAMF-MLSLSPS-A-VYVENIFLGNTLSMSRSDTIQVLIITFSVACIVYMKWKDFVL 158 (273)
Q Consensus 84 ~~~~~~~~d--~~igi~~~~~~algvl-lis~~~~-~-~~l~~~LfG~il~i~~~di~~~~~~~~i~~~~~~~~~r~l~~ 158 (273)
T Consensus 137 ~~~~~~~~~~liL~Giais~~~~a~~~~l~~~~~~~~~~~~~~Wl~Gsl~~~~w~~~~~~~~~~~~-~~~~~~~~r~L~~ 215 (330)
T PRK03784 137 ARRHRLSTARLLLAGVALGIICSALMTWAVYFSTSLDLRQLMYWMMGGFGGVDWRQSWLMLALLPV-LIWLCCQGRPLNM 215 (330)
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHHCHH
T ss_conf 954798815899999999999999999999958999999999997265457988899999999999-9999999865604
Q ss_pred HHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 72468899871787104677999999999999999989999999999999999852089899999999999999999999
Q gi|254780539|r 159 LFFDERHAHSVGINVKLLKMLFFSLLTITIVIGFQTVGILLVIATVITPGATAKLMSKSFGTYLVSSSLLGATSSFLGSY 238 (273)
Q Consensus 159 ~sfD~~~A~~~Gi~v~~~~~l~l~l~al~v~~~v~~vG~llv~allv~Paa~A~~~~~~~~~~~~~s~~~g~~~~~~G~~ 238 (273)
T Consensus 216 L~LGd~~A~~LGv~v~~~r~~~l~~a~ll~a~~Va~~G~IgFVGL-i~PhiaR~l~g~~~~~llp~sal~Ga~lll~aD~ 294 (330)
T PRK03784 216 LALGETSARQLGLPLWFWRNLLVLATGWLVGVSVALAGAIGFIGL-VIPHILRLCGLTDHRVLLPGCALAGASLLLLADI 294 (330)
T ss_pred HHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 217948898789989999999999999999999993115873996-2999999980777505999999999999999999
Q ss_pred HHHHH----CCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99995----7981899999999999999998042445
Q gi|254780539|r 239 ISYFL----DCSPGGIIVIIETSLFLLCLFFFSKQYR 271 (273)
Q Consensus 239 lS~~~----~lp~g~~Iv~~~~~~f~~~~~~~~~~~r 271 (273)
T Consensus 295 ~~R~l~~p~elPvG-ivtaliG~P~fi~Ll~r~rr~r 330 (330)
T PRK03784 295 VARLALASAELPIG-VVTATLGAPVFIWLLLRSHRVR 330 (330)
T ss_pred HHHHHCCCCCCCHH-HHHHHHHHHHHHHHHHHCCCCC
T ss_conf 98562566652099-9999998999999898445789