HHsearch alignment for GI: 254780539 and conserved domain: PRK11285
>PRK11285 araH L-arabinose transporter permease protein; Provisional.
Probab=96.01 E-value=0.089 Score=28.20 Aligned_cols=71 Identities=11% Similarity=0.068 Sum_probs=43.6
Q ss_pred CCHHHCCCCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 211211531002700013578876799999--999888788872468899871787104677999999999999
Q gi|254780539|r 119 VENIFLGNTLSMSRSDTIQVLIITFSVACI--VYMKWKDFVLLFFDERHAHSVGINVKLLKMLFFSLLTITIVI 190 (273)
Q Consensus 119 l~~~LfG~il~i~~~di~~~~~~~~i~~~~--~~~~~r~l~~~sfD~~~A~~~Gi~v~~~~~l~l~l~al~v~~ 190 (273)
T Consensus 167 ~~~~~~~~~~gip~~~~i~i-i~~~~~~~~l~~T~~Gr~lyAvG~N~~AA~~sGI~v~r~~i~ay~isG~lagl 239 (327)
T PRK11285 167 FFALGYASFFGVPAPIWLTV-ACFVVFGFLLNKTVFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLQGLVSAL 239 (327)
T ss_pred HHHHHCCCCCCCCHHHHHHH-HHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99851384237548999999-99999999996340545998816989999881898337401999999999999