HHsearch alignment of GI: 254780539 and MMDB domain: 2qi9_A_

>2qi9_A (A:) Vitamin B12 import system permease protein BTUC; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_A*
Probab=99.90  E-value=7.9e-22  Score=141.54  Aligned_cols=250  Identities=12%  Similarity=0.081  Sum_probs=194.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCC-----CCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             999999999987779999996589963248999999999998----314-----41456899999999999986310246
Q gi|254780539|r   18 IWMSTLIGCVCGLLSAYLILKGWSSIGNGISHAIFPGIVVCH----RLN-----IPLSVGATISGMLATGIMVKIKETTK   88 (273)
Q Consensus        18 ll~~~li~~~~~~lG~~~v~r~~s~~~~alsH~~l~Giala~----~l~-----~~~~~ga~~~~ll~~~li~~l~~~~~   88 (273)
                      .++..++|...+.-|...-..-+.-++|.--+..-.|..++.    ++.     .....+++..+...........++++
T Consensus        60 ~l~a~l~G~~LavsG~~~Q~~~rNpLa~P~ilGi~sga~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (326)
T 2qi9_A           60 TLAVLLVGAALAISGAVXQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLSAIAGALIITLILLRFARRH  139 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSSCCGGGGTHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999999999999936987674245402589999999998245402789999999999999999999876213


Q ss_pred             CCHHHHH--HHHHHHHHH-HHHHHHHHHCC-CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             5115689--999999999-99997521102-2242112115310027000135788767999999998887888724688
Q gi|254780539|r   89 LREDVAI--AVVYIIFYS-FAMFMLSLSPS-AVYVENIFLGNTLSMSRSDTIQVLIITFSVACIVYMKWKDFVLLFFDER  164 (273)
Q Consensus        89 ~~~d~~i--gi~~~~~~a-lgvllis~~~~-~~~l~~~LfG~il~i~~~di~~~~~~~~i~~~~~~~~~r~l~~~sfD~~  164 (273)
                      .+.+..+  |+..+..++ ...++....+. ..+...++.|+....+|+|++...+...+......+.+|++...++|||
T Consensus       140 ~~~~~lil~gi~~~~~~~a~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~l~lg~~  219 (326)
T 2qi9_A          140 LSTSRLLLAGVALGIISSALXTWAIYFSTSVDLRQLXYWXXGGFGGVDWRQSWLXLALIPVLLWISSQSRPXNXLALGEI  219 (326)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHTCCCTTCCGGGHHHHTTTHHHHHHHTTCHHHHHHHHTCHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             56405678999999999999999999840799999999876402546742325678750689999998767665441066


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH---
Q ss_conf             99871787104677999999999999999989999999999999999852089899999999999999999999999---
Q gi|254780539|r  165 HAHSVGINVKLLKMLFFSLLTITIVIGFQTVGILLVIATVITPGATAKLMSKSFGTYLVSSSLLGATSSFLGSYISY---  241 (273)
Q Consensus       165 ~A~~~Gi~v~~~~~l~l~l~al~v~~~v~~vG~llv~allv~Paa~A~~~~~~~~~~~~~s~~~g~~~~~~G~~lS~---  241 (273)
                      .|++.|+|+++++...+.+.++.++.++..+|.+.+.|+ +.|+.+.+...++.++.++.+.+.|......+..++.   
T Consensus       220 ~A~slGv~v~~~~~~~lil~~~lta~~vs~vG~I~FvGL-i~p~iar~l~~~~~~~~l~~s~l~Ga~lll~~d~l~r~~~  298 (326)
T 2qi9_A          220 SARQLGLPLWFWRNVLVAATGWXVGVSVALAGAIGFIGL-VIPHILRLSGLTDHRVLLPGCALAGASALLLADIVARLAL  298 (326)
T ss_dssp             HHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSSTT-HHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             777068776676689999999999999970358889898-6899999862776546999999999999999999996605


Q ss_pred             -HHCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             -9579818999999999999999980424
Q gi|254780539|r  242 -FLDCSPGGIIVIIETSLFLLCLFFFSKQ  269 (273)
Q Consensus       242 -~~~lp~g~~Iv~~~~~~f~~~~~~~~~~  269 (273)
                       ..+.|.|..+.++. ..|++.++.++||
T Consensus       299 ~~~eiPvg~~~~liG-~p~fi~ll~k~~k  326 (326)
T 2qi9_A          299 AAAELPIGVVTATLG-APVFIWLLLKAGR  326 (326)
T ss_dssp             TTCCCCHHHHHHHHH-HHHHHHHHSCC--
T ss_pred             CCCCCHHHHHHHHHH-HHHHHHHHHHCCC
T ss_conf             666631999999999-9999997620479