HHsearch results for GI: 254780539 and protein with PDBid: 2nq2_A

>2nq2_A Hypothetical ABC transporter permease protein HI1471; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=99.90  E-value=3.1e-21  Score=137.27  Aligned_cols=248  Identities=15%  Similarity=0.145  Sum_probs=182.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHC-
Q ss_conf             9999999999877799999965899632--------48999999999998314414---56899999999999986310-
Q gi|254780539|r   18 IWMSTLIGCVCGLLSAYLILKGWSSIGN--------GISHAIFPGIVVCHRLNIPL---SVGATISGMLATGIMVKIKE-   85 (273)
Q Consensus        18 ll~~~li~~~~~~lG~~~v~r~~s~~~~--------alsH~~l~Giala~~l~~~~---~~ga~~~~ll~~~li~~l~~-   85 (273)
                      .+++.++|...+.-|...    |+...+        +++..+-.|++++.+++.+.   ......++.........+.. 
T Consensus        66 ~l~a~l~Ga~LavaG~ll----Q~~~rNpLA~P~iLGissGA~lg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (337)
T 2nq2_A           66 ILTALCVGAGLALSGVVL----QGIFRNPLVNPHIIGVTSGSAFGGTLAIFFGFSLYGLFTSTILFGFGTLALVFLFSFK  141 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHH----HHHTTCTTCCTTTTSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHH----HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999----9865799999066548999999999999984002257899999999999999999996


Q ss_pred             CCCCCHH--HHHHHHHHHHHHHHHHHH-HHHCC---CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             2465115--689999999999999975-21102---22421121153100270001357887679999999988878887
Q gi|254780539|r   86 TTKLRED--VAIAVVYIIFYSFAMFML-SLSPS---AVYVENIFLGNTLSMSRSDTIQVLIITFSVACIVYMKWKDFVLL  159 (273)
Q Consensus        86 ~~~~~~d--~~igi~~~~~~algvlli-s~~~~---~~~l~~~LfG~il~i~~~di~~~~~~~~i~~~~~~~~~r~l~~~  159 (273)
                      +++.+..  ..+|+..+..++....+. ....+   ..+...|++||....+|+|++...+...+......+..|+++..
T Consensus       142 ~~~~~~~~liL~gi~~~~~~~a~~~~~~~l~~~~~~~~~~~~W~~Gs~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~l  221 (337)
T 2nq2_A          142 FNQRSLLMLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLL  221 (337)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHSSCTTTHHHHHHHHTTCCSTTCCHHHHHHHHHHHHHHHHHHHHTTTGGGGG
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCHH
T ss_conf             47787217787679999999999999999722488999999985014356884321331121147888888863005621


Q ss_pred             HCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             24688998717871046779999999999999999899999999999999998520898999999999999999999999
Q gi|254780539|r  160 FFDERHAHSVGINVKLLKMLFFSLLTITIVIGFQTVGILLVIATVITPGATAKLMSKSFGTYLVSSSLLGATSSFLGSYI  239 (273)
Q Consensus       160 sfD~~~A~~~Gi~v~~~~~l~l~l~al~v~~~v~~vG~llv~allv~Paa~A~~~~~~~~~~~~~s~~~g~~~~~~G~~l  239 (273)
                      .+|||.|++.|+|+++.+...+.+.++.++.++..+|.+-+.++ +.|+.+.+...+++++.++.|.+.|..-......+
T Consensus       222 ~lG~~~A~sLGv~v~~~r~~~l~l~~llta~~vs~~G~I~FvGL-i~Phiar~l~g~~~~~~l~~s~l~Ga~lll~aD~i  300 (337)
T 2nq2_A          222 SLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGL-IIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNV  300 (337)
T ss_dssp             GSCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSSTT-HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             07938898789979999999999999999999963776303874-09999999818885339999999999999999999


Q ss_pred             HHHH---CCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             9995---7981899999999999999998042445
Q gi|254780539|r  240 SYFL---DCSPGGIIVIIETSLFLLCLFFFSKQYR  271 (273)
Q Consensus       240 S~~~---~lp~g~~Iv~~~~~~f~~~~~~~~~~~r  271 (273)
                      +...   ++|.|-. ..+.+..|++.++..+||++
T Consensus       301 ~r~l~p~elPvG~v-taliG~p~fl~ll~r~~r~g  334 (337)
T 2nq2_A          301 ARSLSDAEIPISIL-TALIGAPLFGVLVYKLKRGG  334 (337)
T ss_dssp             HHHSCSSCCCHHHH-HHHHHHHHHHHHHHCC----
T ss_pred             HHHCCCCCEEHHHH-HHHHHHHHHHHHHHHHHCCC
T ss_conf             86656777319999-99999999999999852077