HHsearch results for GI: 254780539 and protein with PDBid: 2nq2_A
>2nq2_A Hypothetical ABC transporter permease protein HI1471; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=99.90 E-value=3.1e-21 Score=137.27 Aligned_cols=248 Identities=15% Similarity=0.145 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHC-
Q ss_conf 9999999999877799999965899632--------48999999999998314414---56899999999999986310-
Q gi|254780539|r 18 IWMSTLIGCVCGLLSAYLILKGWSSIGN--------GISHAIFPGIVVCHRLNIPL---SVGATISGMLATGIMVKIKE- 85 (273)
Q Consensus 18 ll~~~li~~~~~~lG~~~v~r~~s~~~~--------alsH~~l~Giala~~l~~~~---~~ga~~~~ll~~~li~~l~~- 85 (273)
.+++.++|...+.-|... |+...+ +++..+-.|++++.+++.+. ......++.........+..
T Consensus 66 ~l~a~l~Ga~LavaG~ll----Q~~~rNpLA~P~iLGissGA~lg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (337)
T 2nq2_A 66 ILTALCVGAGLALSGVVL----QGIFRNPLVNPHIIGVTSGSAFGGTLAIFFGFSLYGLFTSTILFGFGTLALVFLFSFK 141 (337)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHHTTCTTCCTTTTSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHH----HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999----9865799999066548999999999999984002257899999999999999999996
Q ss_pred CCCCCHH--HHHHHHHHHHHHHHHHHH-HHHCC---CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2465115--689999999999999975-21102---22421121153100270001357887679999999988878887
Q gi|254780539|r 86 TTKLRED--VAIAVVYIIFYSFAMFML-SLSPS---AVYVENIFLGNTLSMSRSDTIQVLIITFSVACIVYMKWKDFVLL 159 (273)
Q Consensus 86 ~~~~~~d--~~igi~~~~~~algvlli-s~~~~---~~~l~~~LfG~il~i~~~di~~~~~~~~i~~~~~~~~~r~l~~~ 159 (273)
+++.+.. ..+|+..+..++....+. ....+ ..+...|++||....+|+|++...+...+......+..|+++..
T Consensus 142 ~~~~~~~~liL~gi~~~~~~~a~~~~~~~l~~~~~~~~~~~~W~~Gs~~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~l 221 (337)
T 2nq2_A 142 FNQRSLLMLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLL 221 (337)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHSSCTTTHHHHHHHHTTCCSTTCCHHHHHHHHHHHHHHHHHHHHTTTGGGGG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCHH
T ss_conf 47787217787679999999999999999722488999999985014356884321331121147888888863005621
Q ss_pred HCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 24688998717871046779999999999999999899999999999999998520898999999999999999999999
Q gi|254780539|r 160 FFDERHAHSVGINVKLLKMLFFSLLTITIVIGFQTVGILLVIATVITPGATAKLMSKSFGTYLVSSSLLGATSSFLGSYI 239 (273)
Q Consensus 160 sfD~~~A~~~Gi~v~~~~~l~l~l~al~v~~~v~~vG~llv~allv~Paa~A~~~~~~~~~~~~~s~~~g~~~~~~G~~l 239 (273)
.+|||.|++.|+|+++.+...+.+.++.++.++..+|.+-+.++ +.|+.+.+...+++++.++.|.+.|..-......+
T Consensus 222 ~lG~~~A~sLGv~v~~~r~~~l~l~~llta~~vs~~G~I~FvGL-i~Phiar~l~g~~~~~~l~~s~l~Ga~lll~aD~i 300 (337)
T 2nq2_A 222 SLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGL-IIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNV 300 (337)
T ss_dssp GSCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSSTT-HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 07938898789979999999999999999999963776303874-09999999818885339999999999999999999
Q ss_pred HHHH---CCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9995---7981899999999999999998042445
Q gi|254780539|r 240 SYFL---DCSPGGIIVIIETSLFLLCLFFFSKQYR 271 (273)
Q Consensus 240 S~~~---~lp~g~~Iv~~~~~~f~~~~~~~~~~~r 271 (273)
+... ++|.|-. ..+.+..|++.++..+||++
T Consensus 301 ~r~l~p~elPvG~v-taliG~p~fl~ll~r~~r~g 334 (337)
T 2nq2_A 301 ARSLSDAEIPISIL-TALIGAPLFGVLVYKLKRGG 334 (337)
T ss_dssp HHHSCSSCCCHHHH-HHHHHHHHHHHHHHCC----
T ss_pred HHHCCCCCEEHHHH-HHHHHHHHHHHHHHHHHCCC
T ss_conf 86656777319999-99999999999999852077