HHsearch alignment for GI: 254780540 and conserved domain: COG4120

>COG4120 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=96.69  E-value=0.032  Score=30.06  Aligned_cols=249  Identities=15%  Similarity=0.104  Sum_probs=124.8

Q ss_pred             HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH-HHHH-H--HHHCCCHHH---HHHHHHHHHHHHHHHCCCCC
Q ss_conf             99999999999878--89999997689964458999999-9999-9--972211334---58899999999997312334
Q gi|254780540|r   20 SFIITVIVVIPMSV--LSCFIILKNQSFAGEAISHSVLP-GIVL-S--HMAGIPLEI---GAFIAGMICTLSAGYLKEKS   90 (277)
Q Consensus        20 all~~~l~~~~~~~--lG~~vv~rr~~~~~~alsH~al~-Gial-~--~l~g~~~~l---ga~~~~ll~a~li~~l~~r~   90 (277)
T Consensus         5 ~l~~aleqgLi~~~v~LGvyisFRiLnF-PDLTvdGsfpLGaAv~a~li~~G~nP~~at~~a~~AG~~aG~it~~l~~k~   83 (293)
T COG4120           5 ILIGALEQGLIFAFVALGVYISFRILNF-PDLTVDGSFPLGAAVAATLIAAGVNPFLATLVAMVAGAAAGMITGLLNVKF   83 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHEEEECCC-CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999989999999978613554068-875315751050999999998168779999999998789899999999722


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHH--HHCCC----CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-----HH
Q ss_conf             43024478989999999999863--21024----410345776317534665525789988999999998633-----43
Q gi|254780540|r   91 YFQEDLVLSIVFSGMFAIGIILI--LKVHS----SLHFSHILLGDMLGISKSDIITTAFFAFISISFLILKKN-----DL  159 (277)
Q Consensus        91 ~~~~d~~igiv~~~~~algill~--s~~~~----~~~l~~~LfG~il~v~~~dv~~~~i~~~~~l~~~~~~~r-----~l  159 (277)
T Consensus        84 kI~~-LLAgIL-~M~alySVNLrIMgrpNl~ll~~~ti~~~l~~~~~~~~~~~pli~~vlvii~~~~v~~fl~t~~Glal  161 (293)
T COG4120          84 KILT-LLAGIL-TMIALYSVNLRIMGRPNLPLLGEDTIFTPLPFDGLLDYLLRPLILVVLVIIAKLLVIRFLKTDLGLAL  161 (293)
T ss_pred             CHHH-HHHHHH-HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             2877-999999-99999988899855899653689863353554566225778799999999999999999734536221


Q ss_pred             HHCCCCHHHHHHHCCCCCHHHHHHHHHH----HHHHHHHHHHH---------HHHHHHHHHHHHHHHHH-HHHCCHHHHH
Q ss_conf             1134668899761887423566999999----99999999898---------99999999998778998-5308889999
Q gi|254780540|r  160 LLMIFDPMHAHSMQIPIKLLHYNFLIVL----SLIIVISLKSI---------GIILPPAVLVLPGATAF-LLSKHHTTMI  225 (277)
Q Consensus       160 ~~~sfD~~~A~~~Gi~v~~~~~~~~~li----al~v~~~v~~v---------G~llv~alli~Paa~A~-~~s~s~~~~i  225 (277)
T Consensus       162 rAtG~N~~Ma~a~Gi~t~~~~~~Gl~lSNalvAl~GAL~AQ~~GfADVsmGiG~i-VvGL--AavIIGe~i~~~r~~~~~  238 (293)
T COG4120         162 RATGDNPDMARAQGINTERYTILGLALSNALVALAGALFAQTNGFADVSMGIGTI-VVGL--AAVIIGETIFGSRRLLLA  238 (293)
T ss_pred             ECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHH-HHHH--HHHHHHHHHHHHHHHHHH
T ss_conf             0127987799983987256899989998889998566888743653002574424-5456--799977988745589999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             99999999999999999999578818999999999999999999960233
Q gi|254780540|r  226 LLSVIISVVCTLVGIYISFFINSAAAPTVVILMAIFFVVVYAYSIIINKR  275 (277)
Q Consensus       226 ~~s~~ig~~~~~~G~~lS~~~~~p~g~~Iv~~~~~~~~~~~~~~~l~~rr  275 (277)
T Consensus       239 lla~viGsI~Yr~~i~~~L~~Gl~~sdL-klitallv~i~L~lp~~k~~~  287 (293)
T COG4120         239 LLAVVIGSILYRFAIALALSSGLDASDL-KLITALLVAIALILPKLKRLK  287 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHH-HHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999999999999999999859986777-899999999999708888743