HHsearch alignment for GI: 254780540 and conserved domain: PRK11301

Probab=96.91  E-value=0.021  Score=31.03  Aligned_cols=108  Identities=9%  Similarity=0.167  Sum_probs=57.1

Q ss_pred             HHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             63343113466889976188742356699999999999999898999999999-98778998530888999999999999
Q gi|254780540|r  155 KKNDLLLMIFDPMHAHSMQIPIKLLHYNFLIVLSLIIVISLKSIGIILPPAVL-VLPGATAFLLSKHHTTMILLSVIISV  233 (277)
Q Consensus       155 ~~r~l~~~sfD~~~A~~~Gi~v~~~~~~~~~lial~v~~~v~~vG~llv~all-i~Paa~A~~~s~s~~~~i~~s~~ig~  233 (277)
T Consensus       286 ~GRal~AIRedE~AA~alGInv~r~KL~AFalsA~~AGl----AGaLyA~~~g~IsP~~----F~~~~S~~iL~mVVlGG  357 (416)
T PRK11301        286 LGRAWEALREDEIACRSLGLNPTRIKLSAFTIGAAFAGF----AGTFFAARQGFVSPES----FTFIESAFILAIVVLGG  357 (416)
T ss_pred             HHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH----HHHHHHHHCCEECCCC----CCHHHHHHHHHHHEECC
T ss_conf             858999996279999985977699999999999999999----9999998816348330----65999999797513327


Q ss_pred             HHHHHHHHHHHHH-----C--CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999999995-----7--88189999999999999999999
Q gi|254780540|r  234 VCTLVGIYISFFI-----N--SAAAPTVVILMAIFFVVVYAYSI  270 (277)
Q Consensus       234 ~~~~~G~~lS~~~-----~--~p~g~~Iv~~~~~~~~~~~~~~~  270 (277)
T Consensus       358 ~Gs~~G~ilGA~il~~LpE~lr~~~~~r~lvfG~lLvl~mlf~P  401 (416)
T PRK11301        358 MGSQLGVILAAILLVVLPELMRDFNEYRMLMFGLLMVLMMIWRP  401 (416)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             64519999999999999999976565599999999999999869