HHsearch alignment of GI: 254780540 and MMDB domain: 2qi9_A_

>2qi9_A (A:) Vitamin B12 import system permease protein BTUC; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_A*
Probab=99.91  E-value=3e-23  Score=143.15  Aligned_cols=245  Identities=10%  Similarity=0.040  Sum_probs=194.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             999999999998788999999768996445----89999999999997221-----133458899999999997312334
Q gi|254780540|r   20 SFIITVIVVIPMSVLSCFIILKNQSFAGEA----ISHSVLPGIVLSHMAGI-----PLEIGAFIAGMICTLSAGYLKEKS   90 (277)
Q Consensus        20 all~~~l~~~~~~~lG~~vv~rr~~~~~~a----lsH~al~Gial~~l~g~-----~~~lga~~~~ll~a~li~~l~~r~   90 (277)
                      -.+++.+.|...+.-|......-+--++|.    ++..+..|++++.+...     ....+++..+...........+|+
T Consensus        59 R~l~a~l~G~~LavsG~~~Q~~~rNpLa~P~ilGi~sga~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (326)
T 2qi9_A           59 RTLAVLLVGAALAISGAVXQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPNWALGLSAIAGALIITLILLRFARR  138 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSSCCGGGGTHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999999999999999993698767424540258999999999824540278999999999999999999987621


Q ss_pred             CCCHHHHH--HHHHHHHHHHHHHH-HHHCC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             43024478--98999999999986-32102-4410345776317534665525789988999999998633431134668
Q gi|254780540|r   91 YFQEDLVL--SIVFSGMFAIGIIL-ILKVH-SSLHFSHILLGDMLGISKSDIITTAFFAFISISFLILKKNDLLLMIFDP  166 (277)
Q Consensus        91 ~~~~d~~i--giv~~~~~algill-~s~~~-~~~~l~~~LfG~il~v~~~dv~~~~i~~~~~l~~~~~~~r~l~~~sfD~  166 (277)
                      +.+.+..+  |+..+..++....+ ....+ ...+...++.|+....+|+|++...+...+........+|++..+.+||
T Consensus       139 ~~~~~~lil~gi~~~~~~~a~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~l~lg~  218 (326)
T 2qi9_A          139 HLSTSRLLLAGVALGIISSALXTWAIYFSTSVDLRQLXYWXXGGFGGVDWRQSWLXLALIPVLLWISSQSRPXNXLALGE  218 (326)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHTCCCTTCCGGGHHHHTTTHHHHHHHTTCHHHHHHHHTCH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             35640567899999999999999999984079999999987640254674232567875068999999876766544106


Q ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH---
Q ss_conf             89976188742356699999999999999898999999999987789985308889999999999999999999999---
Q gi|254780540|r  167 MHAHSMQIPIKLLHYNFLIVLSLIIVISLKSIGIILPPAVLVLPGATAFLLSKHHTTMILLSVIISVVCTLVGIYIS---  243 (277)
Q Consensus       167 ~~A~~~Gi~v~~~~~~~~~lial~v~~~v~~vG~llv~alli~Paa~A~~~s~s~~~~i~~s~~ig~~~~~~G~~lS---  243 (277)
                      |.|++.|+|+++++...+.+.++.++.++..+|.+.+.++ +.|+.+.+...++.++.++.+.++|......+-.++   
T Consensus       219 ~~A~slGv~v~~~~~~~lil~~~lta~~vs~vG~I~FvGL-i~p~iar~l~~~~~~~~l~~s~l~Ga~lll~~d~l~r~~  297 (326)
T 2qi9_A          219 ISARQLGLPLWFWRNVLVAATGWXVGVSVALAGAIGFIGL-VIPHILRLSGLTDHRVLLPGCALAGASALLLADIVARLA  297 (326)
T ss_dssp             HHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSSTT-HHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             6777068776676689999999999999970358889898-689999986277654699999999999999999999660


Q ss_pred             -HHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             -9957881899999999999999
Q gi|254780540|r  244 -FFINSAAAPTVVILMAIFFVVV  265 (277)
Q Consensus       244 -~~~~~p~g~~Iv~~~~~~~~~~  265 (277)
                       ++.+.|.|..+.++.+.+|+..
T Consensus       298 ~~~~eiPvg~~~~liG~p~fi~l  320 (326)
T 2qi9_A          298 LAAAELPIGVVTATLGAPVFIWL  320 (326)
T ss_dssp             STTCCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             56666319999999999999997