HHsearch alignment for GI: 254780543 and conserved domain: PRK08183

>PRK08183 NADH dehydrogenase; Validated.
Probab=100.00  E-value=0  Score=370.37  Aligned_cols=129  Identities=53%  Similarity=1.030  Sum_probs=119.9

Q ss_pred             HHHHHHHHHCCCCCEEHHHHHHHHHCEEEEEECCCCEEEEECCC--CCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCC
Q ss_conf             66778673314796610214331307043666658786550577--7777620899478667553686532003214168
Q gi|254780543|r    2 KNFLLQIFTWWNGQTLGTRFFTWRFGHIVGKDEFGNTYYESRKN--INGSSRRWVIYNGYTDPSSIPPMWHGWIHHRRIG   79 (131)
Q Consensus         2 ~~~l~~iftWwn~~TlgT~l~t~~~g~~VG~D~~GNkYye~~~~--~~~~~rRwV~Y~~~~d~s~IppeWh~WLh~~~d~   79 (131)
T Consensus         1 ~~~~~~~ftwwn~~t~gT~l~t~~~G~lVG~D~~GNkYYe~k~~~~~~~~~~RWViY~g~~eaS~VPpeWh~WLH~t~d~   80 (133)
T PRK08183          1 KSFLLQIFTWWNGQTLGTRLFTWRKGERVGEDEFGNRYYRTKGGKPSLGRERRWVIYNGYAEASRIPPEWHGWLHHTVDV   80 (133)
T ss_pred             CCHHHHEEHEECCCCHHHHHHHEECCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHEEECCCCCCC
T ss_conf             94563200102797187840211824683770888870334777666787536889699887262582320001046677


Q ss_pred             CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf             8985645676110167687788710327873334666-44444787779999
Q gi|254780543|r   80 VPKAEEENSFDWQKPHCVNATGSLNSYYPRFRRDNMA-GTSTKGKYSAWSPD  130 (131)
Q Consensus        80 ~P~~~~~~~~~Wqk~h~~N~TGT~~AY~P~~~~~~~~-~~~~~~~Y~aW~Pe  130 (131)
T Consensus        81 ~P~~~~~~~~~Wqk~H~pNlTGT~~AY~P~g~~~~~~~~~~~~~dYe~W~P~  132 (133)
T PRK08183         81 PPTEEPYAPREWEKPHQPNLTGTPLAYRPKGSILRGGERPRATGDYEAWTPG  132 (133)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9874767687656677888889965786998534678663012786678989