HHsearch alignment for GI: 254780543 and conserved domain: PRK08183
>PRK08183 NADH dehydrogenase; Validated.
Probab=100.00 E-value=0 Score=370.37 Aligned_cols=129 Identities=53% Similarity=1.030 Sum_probs=119.9
Q ss_pred HHHHHHHHHCCCCCEEHHHHHHHHHCEEEEEECCCCEEEEECCC--CCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 66778673314796610214331307043666658786550577--7777620899478667553686532003214168
Q gi|254780543|r 2 KNFLLQIFTWWNGQTLGTRFFTWRFGHIVGKDEFGNTYYESRKN--INGSSRRWVIYNGYTDPSSIPPMWHGWIHHRRIG 79 (131)
Q Consensus 2 ~~~l~~iftWwn~~TlgT~l~t~~~g~~VG~D~~GNkYye~~~~--~~~~~rRwV~Y~~~~d~s~IppeWh~WLh~~~d~ 79 (131)
T Consensus 1 ~~~~~~~ftwwn~~t~gT~l~t~~~G~lVG~D~~GNkYYe~k~~~~~~~~~~RWViY~g~~eaS~VPpeWh~WLH~t~d~ 80 (133)
T PRK08183 1 KSFLLQIFTWWNGQTLGTRLFTWRKGERVGEDEFGNRYYRTKGGKPSLGRERRWVIYNGYAEASRIPPEWHGWLHHTVDV 80 (133)
T ss_pred CCHHHHEEHEECCCCHHHHHHHEECCEEEEECCCCCEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHEEECCCCCCC
T ss_conf 94563200102797187840211824683770888870334777666787536889699887262582320001046677
Q ss_pred CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
Q ss_conf 8985645676110167687788710327873334666-44444787779999
Q gi|254780543|r 80 VPKAEEENSFDWQKPHCVNATGSLNSYYPRFRRDNMA-GTSTKGKYSAWSPD 130 (131)
Q Consensus 80 ~P~~~~~~~~~Wqk~h~~N~TGT~~AY~P~~~~~~~~-~~~~~~~Y~aW~Pe 130 (131)
T Consensus 81 ~P~~~~~~~~~Wqk~H~pNlTGT~~AY~P~g~~~~~~~~~~~~~dYe~W~P~ 132 (133)
T PRK08183 81 PPTEEPYAPREWEKPHQPNLTGTPLAYRPKGSILRGGERPRATGDYEAWTPG 132 (133)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9874767687656677888889965786998534678663012786678989