HHsearch alignment for GI: 254780545 and conserved domain: CHL00081
>CHL00081 chlI Mg-protoporyphyrin IX chelatase.
Probab=99.33 E-value=3.5e-11 Score=99.90 Aligned_cols=159 Identities=30% Similarity=0.416 Sum_probs=100.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCEEECCCCCHHHHHHHHHHHCCC-------CCCEECC
Q ss_conf 4225698898528899999999987433567664201233--311003787425888999974246-------9970205
Q gi|254780545|r 142 VGSVTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIP--HGVLLVGPPGTGKTLLARAVAGEA-------NVPFFTI 212 (647)
Q Consensus 142 ~~~v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p--~g~ll~GppGtGKTlla~a~a~e~-------~~~f~~~ 212 (647)
T Consensus 6 ~~~fPf~aIvGQe~~k~aLll--------------~av~p~iGgVLi~G~~GtgKStlvRala~lLP~i~~v~~~~f~~~ 71 (347)
T CHL00081 6 RPVFPFTAIVGQEEMKLALLL--------------NVIDPKIGGVMIMGDRGTGKSTTIRALVDLLPEIEVVKNDPFNSD 71 (347)
T ss_pred CCCCCHHHHCCHHHHHHHHHH--------------HHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf 788984065384999999999--------------825788786998789987499999999985787422068876789
Q ss_pred C------HH-------------------HHHHHHHHCCHHHHH---HH----------HH---HHHHHCCHHEEHHHHHH
Q ss_conf 8------57-------------------886444203324599---99----------99---99873780120632356
Q gi|254780545|r 213 S------GS-------------------DFVELFVGVGASRVR---DM----------FE---QAKNNSPCIVFVDEIDA 251 (647)
Q Consensus 213 ~------~s-------------------~~~~~~~g~g~~~vr---~l----------f~---~a~~~~p~iifiDeida 251 (647)
T Consensus 72 p~~p~~~~~~~~~~~~~~~~~~~~~~~~p~v~lPlgaTEDrv~GslDie~al~~G~~~f~pGlLa~A~-rGiLyvDEINl 150 (347)
T CHL00081 72 PRDPDLMSDEVRERIRNGEKIPTKKIKIPMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKAN-RGILYVDEVNL 150 (347)
T ss_pred CCCCCCCCHHHHHHHCCCCCCCCEECCCCEEECCCCCCCCEECCCHHHHHHHHCCCCCCCCCHHHHCC-CCEEEEEHHHH
T ss_conf 89810024266654314666752114686253688885230114000998984587115653122203-88588614543
Q ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHH---------CCCCCC--CCEEEEEECCCCC-CCCHHHCCCCCCCCEEEEC-HH
Q ss_conf 414455789886268898899899853---------032357--7829999629810-0883331656423141000-13
Q gi|254780545|r 252 VGRHRGIGLGGGNDEREQTLNQLLVEM---------DGFESS--EGVILIAATNRPD-VLDAALLRPGRFDRQITVP-NP 318 (647)
Q Consensus 252 ~~~~r~~~~~~~~~e~~~~ln~ll~~m---------dg~~~~--~~v~vi~aTn~~~-~lD~al~RpgRfd~~i~~~-~P 318 (647)
T Consensus 151 l~--------------d~~v~~LLda~a~G~~~VEReG~S~~~Pa~F~liaT~NPeEgeLrp~llD--RF~l~v~v~~~~ 214 (347)
T CHL00081 151 LD--------------DHLVDILLDSAASGWNTVEREGISIRHPARFVLIGSGNPEEGELRPQLLD--RFGMHAEIRTVK 214 (347)
T ss_pred HH--------------HHHHHHHHHHHHCCEEEECCCCEEECCCCCEEEEECCCCCCCCCCHHHHH--HEEEEEECCCCC
T ss_conf 23--------------79999999998558089804642330575006885578655674888882--632267458878
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 4788999999985
Q gi|254780545|r 319 DIVGREHILMVHS 331 (647)
Q Consensus 319 ~~~~r~~i~~~~~ 331 (647)
T Consensus 215 ~~e~R~eiv~~r~ 227 (347)
T CHL00081 215 DPELRVKIVEQRS 227 (347)
T ss_pred CHHHHHHHHHHHH
T ss_conf 9899999999999