HHsearch alignment for GI: 254780545 and conserved domain: CHL00181
>CHL00181 cbbX CbbX; Provisional.
Probab=99.81 E-value=1.9e-18 Score=152.43 Aligned_cols=209 Identities=23% Similarity=0.346 Sum_probs=156.8
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCEEECCCCCHHHHHHHHHHHCC---CC----CCEECCCH
Q ss_conf 698-898528899999999987433567664201233---31100378742588899997424---69----97020585
Q gi|254780545|r 146 TFK-DVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIP---HGVLLVGPPGTGKTLLARAVAGE---AN----VPFFTISG 214 (647)
Q Consensus 146 ~f~-dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p---~g~ll~GppGtGKTlla~a~a~e---~~----~~f~~~~~ 214 (647)
T Consensus 20 eLd~eliGL~~VK~~v~~l~~~~~~~~~R~~~Gl~~~~~s~h~vF~GnPGTGKTTVARl~a~il~~lG~L~~g~vve~~r 99 (287)
T CHL00181 20 ELDEELIGLVPVKTRIREIAALLLVDRLRKNLGLVSSSPGLHMSFTGSPGTGKTTVALKMADILYRLGYIKKGHLITVTR 99 (287)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECH
T ss_conf 99886469699999999999999999999987999888765388878998679999999999999869955895899535
Q ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
Q ss_conf 78864442033245999999998737801206323564144557898862688988998998530323577829999629
Q gi|254780545|r 215 SDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATN 294 (647)
Q Consensus 215 s~~~~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn 294 (647)
T Consensus 100 ~dLvg~yvG~Ta~kt~~~i~~a~---GGVLfIDEAY~L~~~~~-----~~dfg~eaidtLl~~me~--~~~~lvvI~AGY 169 (287)
T CHL00181 100 DDLVGQYIGHTAPKTKEVLKKAM---GGVLFIDEAYYLYKPDN-----ERDYGAEAIEILLQVMEN--QRDDLVVIFAGY 169 (287)
T ss_pred HHHCCCCCCCCHHHHHHHHHHCC---CCEEEEECHHHHCCCCC-----CCCCHHHHHHHHHHHHHH--CCCCEEEEEECC
T ss_conf 88416353521699999999645---98799824465357889-----998379999999999870--799889998467
Q ss_pred CCCCCC------HHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCC--CCCCCCC---HHHHHH--HHHCC-CHHHHHHH
Q ss_conf 810088------3331656423141000134788999999985488--7773211---024544--12037-98999999
Q gi|254780545|r 295 RPDVLD------AALLRPGRFDRQITVPNPDIVGREHILMVHSRNV--PLAPNVI---LKTIAR--GTPGF-SGADLRNL 360 (647)
Q Consensus 295 ~~~~lD------~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~~~--~~~~~~d---~~~la~--~t~g~-sgAdi~~~ 360 (647)
T Consensus 170 -~~eM~~fl~~NpGL~s--Rf~~~i~F~dYt~~EL~~I~~~~~~~~~~~l~~~a~~~l~~~~~~~~~~~~FGNaR~vrnl 246 (287)
T CHL00181 170 -KDRMDKFYESNPGLSS--RVANHVDFPDYTPEELLQIAKMMLEEQQYQLTPEAEKVLLDYIKRRMEQPLFANARSVRNA 246 (287)
T ss_pred -HHHHHHHHHHCCCHHH--HCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf -8999999985904787--6887237798599999999999999869825879999999999985089998748999999
Q ss_pred HHHHHHH
Q ss_conf 9998764
Q gi|254780545|r 361 VNEAALM 367 (647)
Q Consensus 361 ~~eAa~~ 367 (647)
T Consensus 247 ~e~a~~~ 253 (287)
T CHL00181 247 IDRARMR 253 (287)
T ss_pred HHHHHHH
T ss_conf 9999999