HHsearch alignment for GI: 254780545 and conserved domain: CHL00181

>CHL00181 cbbX CbbX; Provisional.
Probab=99.81  E-value=1.9e-18  Score=152.43  Aligned_cols=209  Identities=23%  Similarity=0.346  Sum_probs=156.8

Q ss_pred             HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCEEECCCCCHHHHHHHHHHHCC---CC----CCEECCCH
Q ss_conf             698-898528899999999987433567664201233---31100378742588899997424---69----97020585
Q gi|254780545|r  146 TFK-DVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIP---HGVLLVGPPGTGKTLLARAVAGE---AN----VPFFTISG  214 (647)
Q Consensus       146 ~f~-dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p---~g~ll~GppGtGKTlla~a~a~e---~~----~~f~~~~~  214 (647)
T Consensus        20 eLd~eliGL~~VK~~v~~l~~~~~~~~~R~~~Gl~~~~~s~h~vF~GnPGTGKTTVARl~a~il~~lG~L~~g~vve~~r   99 (287)
T CHL00181         20 ELDEELIGLVPVKTRIREIAALLLVDRLRKNLGLVSSSPGLHMSFTGSPGTGKTTVALKMADILYRLGYIKKGHLITVTR   99 (287)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECH
T ss_conf             99886469699999999999999999999987999888765388878998679999999999999869955895899535


Q ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
Q ss_conf             78864442033245999999998737801206323564144557898862688988998998530323577829999629
Q gi|254780545|r  215 SDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATN  294 (647)
Q Consensus       215 s~~~~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn  294 (647)
T Consensus       100 ~dLvg~yvG~Ta~kt~~~i~~a~---GGVLfIDEAY~L~~~~~-----~~dfg~eaidtLl~~me~--~~~~lvvI~AGY  169 (287)
T CHL00181        100 DDLVGQYIGHTAPKTKEVLKKAM---GGVLFIDEAYYLYKPDN-----ERDYGAEAIEILLQVMEN--QRDDLVVIFAGY  169 (287)
T ss_pred             HHHCCCCCCCCHHHHHHHHHHCC---CCEEEEECHHHHCCCCC-----CCCCHHHHHHHHHHHHHH--CCCCEEEEEECC
T ss_conf             88416353521699999999645---98799824465357889-----998379999999999870--799889998467


Q ss_pred             CCCCCC------HHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCC--CCCCCCC---HHHHHH--HHHCC-CHHHHHHH
Q ss_conf             810088------3331656423141000134788999999985488--7773211---024544--12037-98999999
Q gi|254780545|r  295 RPDVLD------AALLRPGRFDRQITVPNPDIVGREHILMVHSRNV--PLAPNVI---LKTIAR--GTPGF-SGADLRNL  360 (647)
Q Consensus       295 ~~~~lD------~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~~~--~~~~~~d---~~~la~--~t~g~-sgAdi~~~  360 (647)
T Consensus       170 -~~eM~~fl~~NpGL~s--Rf~~~i~F~dYt~~EL~~I~~~~~~~~~~~l~~~a~~~l~~~~~~~~~~~~FGNaR~vrnl  246 (287)
T CHL00181        170 -KDRMDKFYESNPGLSS--RVANHVDFPDYTPEELLQIAKMMLEEQQYQLTPEAEKVLLDYIKRRMEQPLFANARSVRNA  246 (287)
T ss_pred             -HHHHHHHHHHCCCHHH--HCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf             -8999999985904787--6887237798599999999999999869825879999999999985089998748999999


Q ss_pred             HHHHHHH
Q ss_conf             9998764
Q gi|254780545|r  361 VNEAALM  367 (647)
Q Consensus       361 ~~eAa~~  367 (647)
T Consensus       247 ~e~a~~~  253 (287)
T CHL00181        247 IDRARMR  253 (287)
T ss_pred             HHHHHHH
T ss_conf             9999999