HHsearch alignment for GI: 254780545 and conserved domain: COG0464
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].
Probab=99.98 E-value=7.5e-32 Score=249.50 Aligned_cols=257 Identities=43% Similarity=0.640 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEH
Q ss_conf 43356766420123331100378742588899997424699702058578864442033245999999998737801206
Q gi|254780545|r 167 LCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNSPCIVFV 246 (647)
Q Consensus 167 l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~~p~iifi 246 (647)
T Consensus 4 ~~~~~~~~~~~~~~~~~v~~~g~~~~~~t~~~~~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ii~~ 82 (494)
T COG0464 4 LKEPELFKKLGIEPPKGVLLHGPPGTGKTLLARALANE-GAEFLSINGPEILSKYVGESELRLRELFEEAEKLAPSIIFI 82 (494)
T ss_pred CCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 52479998706676421000368876503665676512-54101356522432220510899999989998639763640
Q ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEECHHHHHHHHHH
Q ss_conf 32356414455789886268898899899853032357782999962981008833316564231410001347889999
Q gi|254780545|r 247 DEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDVLDAALLRPGRFDRQITVPNPDIVGREHI 326 (647)
Q Consensus 247 Deida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~lD~al~RpgRfd~~i~~~~P~~~~r~~i 326 (647)
T Consensus 83 d~~~~~~~~~~~~~-~--~~~~~v~~~l~~~~d~~~~~~-v~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~i 158 (494)
T COG0464 83 DEIDALAPKRSSDQ-G--EVERRVVAQLLALMDGLKRGQ-VIVIGATNRPDGLDPAKRRPGRFDREIEVNLPDEAGRLEI 158 (494)
T ss_pred CCCCCCCCCCCCCC-C--HHHHHHHHHHHHHHHCCCCCC-EEEEECCCCCCCHHHHHHCCHHHHHHHHHCCCCHHCCHHH
T ss_conf 44332123444442-1--045789998998764246563-4674134453211277753137678876336541014246
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH------CCCCCHHHHHHHHHHCCC----CCCCCC
Q ss_conf 9998548877732110245441203798999999999876455320------242104568999750136----865567
Q gi|254780545|r 327 LMVHSRNVPLAPNVILKTIARGTPGFSGADLRNLVNEAALMAARRN------RRLVTMQEFEDAKDKILM----GAERRS 396 (647)
Q Consensus 327 ~~~~~~~~~~~~~~d~~~la~~t~g~sgAdi~~~~~eAa~~a~r~~------~~~i~~~dl~~A~~rv~~----G~ek~~ 396 (647)
T Consensus 159 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 238 (494)
T COG0464 159 LQIHTRLMFLGPPGTGKTLAARTVGKSGADLGALAKEAALRELRRAIDLVGEYIGVTEDDFEEALKKVLPSRGVLFEDED 238 (494)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHCCCCCCCEECCCC
T ss_conf 51011101257864278899873232132488774178888875002333033202199999999861245563003688
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 666866778999999999999985058773234
Q gi|254780545|r 397 TAMTEEEKKITAYHEAGHAVVACHVPKADPLHK 429 (647)
Q Consensus 397 ~~~~~~ek~~vAyHEAGHAlva~~l~~~~~v~k 429 (647)
T Consensus 239 v~~~di-ggl~~~k~~l~e~v~~~~~~~e~~~~ 270 (494)
T COG0464 239 VTLDDI-GGLEEAKEELKEAIETPLKRPELFRK 270 (494)
T ss_pred CEEEEE-CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 514532-36377999999999999970887632