HHsearch alignment for GI: 254780545 and conserved domain: KOG0735
>KOG0735 consensus.
Probab=99.81 E-value=7.1e-19 Score=155.59 Aligned_cols=238 Identities=21% Similarity=0.238 Sum_probs=163.4
Q ss_pred CCCCEEECCCCCHHHHHHHHHHHCCCCCC----EECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCC
Q ss_conf 33311003787425888999974246997----02058578864442033245999999998737801206323564144
Q gi|254780545|r 180 IPHGVLLVGPPGTGKTLLARAVAGEANVP----FFTISGSDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRH 255 (647)
Q Consensus 180 ~p~g~ll~GppGtGKTlla~a~a~e~~~~----f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~ 255 (647)
T Consensus 430 ~~~~Ill~G~~GsGKT~L~kal~~~~~k~~~~hv~~v~Cs~l~~~~~e~iQk~l~~vfse~~~~~PSiIvLDdld~l~~- 508 (952)
T KOG0735 430 RHGNILLNGPKGSGKTNLVKALFDYYSKDLIAHVEIVSCSTLDGSSLEKIQKFLNNVFSEALWYAPSIIVLDDLDCLAS- 508 (952)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHC-
T ss_conf 4661898679987776999999987515650699997522104204899999999999998863780899705035405-
Q ss_pred CCCCCCCC-CHHHHHHHHHHHHHH-CCCC-CCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHC
Q ss_conf 55789886-268898899899853-0323-57782999962981008833316564231410001347889999999854
Q gi|254780545|r 256 RGIGLGGG-NDEREQTLNQLLVEM-DGFE-SSEGVILIAATNRPDVLDAALLRPGRFDRQITVPNPDIVGREHILMVHSR 332 (647)
Q Consensus 256 r~~~~~~~-~~e~~~~ln~ll~~m-dg~~-~~~~v~vi~aTn~~~~lD~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~ 332 (647)
T Consensus 509 -~s~~e~~q~~~~~~rla~flnqvi~~y~~~~~~ia~Iat~qe~qtl~~~L~s~~~Fq~~~~L~ap~~~~R~~IL~~~~s 587 (952)
T KOG0735 509 -ASSNENGQDGVVSERLAAFLNQVIKIYLKRNRKIAVIATGQELQTLNPLLVSPLLFQIVIALPAPAVTRRKEILTTIFS 587 (952)
T ss_pred -CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf -6844477302899999999999999987068579999851434203853347631478881589235679999999997
Q ss_pred CCCCCC-CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHCCC----CCCCCCCCCCHHH
Q ss_conf 887773-21102454412037989999999998764553----20242104568999750136----8655676668667
Q gi|254780545|r 333 NVPLAP-NVILKTIARGTPGFSGADLRNLVNEAALMAAR----RNRRLVTMQEFEDAKDKILM----GAERRSTAMTEEE 403 (647)
Q Consensus 333 ~~~~~~-~~d~~~la~~t~g~sgAdi~~~~~eAa~~a~r----~~~~~i~~~dl~~A~~rv~~----G~ek~~~~~~~~e 403 (647)
T Consensus 588 ~~~~~~~~~dLd~ls~~TEGy~~~DL~ifVeRai~~a~leris~~~klltke~f~ksL~~F~P~aLR~i-k~~k~tgi~w 666 (952)
T KOG0735 588 KNLSDITMDDLDFLSVKTEGYLATDLVIFVERAIHEAFLERISNGPKLLTKELFEKSLKDFVPLALRGI-KLVKSTGIRW 666 (952)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHC-CCCCCCCCCC
T ss_conf 553454567899888760784404479999999999998875167631018899999874076776403-0156678771
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 78999999999999985
Q gi|254780545|r 404 KKITAYHEAGHAVVACH 420 (647)
Q Consensus 404 k~~vAyHEAGHAlva~~ 420 (647)
T Consensus 667 ~digg~~~~k~~l~~~i 683 (952)
T KOG0735 667 EDIGGLFEAKKVLEEVI 683 (952)
T ss_pred EECCCHHHHHHHHHHHH
T ss_conf 00335899999999998