HHsearch alignment for GI: 254780545 and conserved domain: KOG0736

Probab=99.90  E-value=1.3e-22  Score=182.51  Aligned_cols=229  Identities=30%  Similarity=0.454  Sum_probs=182.1

Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC
Q ss_conf             99987433567664201233311003787425888999974246997020585788644420332459999999987378
Q gi|254780545|r  162 EIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNSP  241 (647)
Q Consensus       162 ~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~~p  241 (647)
T Consensus       412 ~l~~vl~p~~~~s~~~~~~~~~vLLhG~~g~GK~t~V~~vas~lg~h~~evdc~el~~~s~~~~etkl~~~f~~a~~~~p  491 (953)
T KOG0736         412 ELVAVLSPQKQPSGALLTLNPSVLLHGPPGSGKTTVVRAVASELGLHLLEVDCYELVAESASHTETKLQAIFSRARRCSP  491 (953)
T ss_pred             HHHHHHCCCCCCCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             99998486558530013355379986799987579999999983872570138988643633137899999998752686


Q ss_pred             HHEEHHHHHHHHCCCCCCCCCCCHHHH-HHHHHHHHHHCCCC-CCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEECHHH
Q ss_conf             012063235641445578988626889-88998998530323-5778299996298100883331656423141000134
Q gi|254780545|r  242 CIVFVDEIDAVGRHRGIGLGGGNDERE-QTLNQLLVEMDGFE-SSEGVILIAATNRPDVLDAALLRPGRFDRQITVPNPD  319 (647)
Q Consensus       242 ~iifiDeida~~~~r~~~~~~~~~e~~-~~ln~ll~~mdg~~-~~~~v~vi~aTn~~~~lD~al~RpgRfd~~i~~~~P~  319 (647)
T Consensus       492 avifl~~~dvl~id~dg----ged~rl~~~i~~~ls-~e~~~~~~~~~ivv~t~~s~~~lp~~i~~--~f~~ei~~~~ls  564 (953)
T KOG0736         492 AVLFLRNLDVLGIDQDG----GEDARLLKVIRHLLS-NEDFKFSCPPVIVVATTSSIEDLPADIQS--LFLHEIEVPALS  564 (953)
T ss_pred             EEEEEECCCEEEECCCC----CHHHHHHHHHHHHHH-CCCCCCCCCCEEEEEECCCCCCCCHHHHH--HHHHHCCCCCCC
T ss_conf             28987224245533777----442779999999972-02356779965999962530239878987--526521377888


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH---HHHHC-----------------CCCCHH
Q ss_conf             7889999999854887773211024544120379899999999987645---53202-----------------421045
Q gi|254780545|r  320 IVGREHILMVHSRNVPLAPNVILKTIARGTPGFSGADLRNLVNEAALMA---ARRNR-----------------RLVTMQ  379 (647)
Q Consensus       320 ~~~r~~i~~~~~~~~~~~~~~d~~~la~~t~g~sgAdi~~~~~eAa~~a---~r~~~-----------------~~i~~~  379 (647)
T Consensus       565 e~qRl~iLq~y~~~~~~n~~v~~k~~a~~t~gfs~~~L~~l~~~~s~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~l~~e  644 (953)
T KOG0736         565 EEQRLEILQWYLNHLPLNQDVNLKQLARKTSGFSFGDLEALVAHSSLAAKTRIKNKGLAGGLQEEDEGELCAAGFLLTEE  644 (953)
T ss_pred             HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEECHH
T ss_conf             78899999999830652357787899986589877779977147518889999752014431110245401246410198


Q ss_pred             HHHHHHHHC------CCCCCCCCC
Q ss_conf             689997501------368655676
Q gi|254780545|r  380 EFEDAKDKI------LMGAERRST  397 (647)
Q Consensus       380 dl~~A~~rv------~~G~ek~~~  397 (647)
T Consensus       645 df~kals~~~~~fs~aiGAPKIPn  668 (953)
T KOG0736         645 DFDKALSRLQKEFSDAIGAPKIPN  668 (953)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             888898898886555307988896