HHsearch alignment for GI: 254780545 and conserved domain: KOG0740
>KOG0740 consensus.
Probab=100.00 E-value=1.4e-45 Score=347.78 Aligned_cols=245 Identities=34% Similarity=0.564 Sum_probs=211.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHH
Q ss_conf 1124225698898528899999999987-433567664201233311003787425888999974246997020585788
Q gi|254780545|r 139 SGNVGSVTFKDVAGVDEAKEDLQEIVDF-LCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDF 217 (647)
Q Consensus 139 ~~~~~~v~f~dv~g~~~~k~~~~~~v~~-l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~ 217 (647)
T Consensus 144 ~~~~~~v~~~di~gl~~~k~~l~e~vi~p~lr~d~F~gl-r~p~rglLLfGPpgtGKtmL~~aiAsE~~atff~iSassL 222 (428)
T KOG0740 144 GDTLRNVGWDDIAGLEDAKQSLKEAVILPLLRPDLFLGL-REPVRGLLLFGPPGTGKTMLAKAIATESGATFFNISASSL 222 (428)
T ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCC-CCCCCHHHEECCCCCCHHHHHHHHHHHHCCEEEECCHHHH
T ss_conf 602775413577405668998654232204553765235-4453111200589884479999998620665763068886
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC--CCCEEEEEECCC
Q ss_conf 644420332459999999987378012063235641445578988626889889989985303235--778299996298
Q gi|254780545|r 218 VELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFES--SEGVILIAATNR 295 (647)
Q Consensus 218 ~~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~--~~~v~vi~aTn~ 295 (647)
T Consensus 223 tsK~~Ge~eK~vralf~vAr~~qPsvifidEidslls~Rs~~---e~e~srr~ktefLiq~~~~~s~~~drvlvigaTN~ 299 (428)
T KOG0740 223 TSKYVGESEKLVRALFKVARSLQPSVIFIDEIDSLLSKRSDN---EHESSRRLKTEFLLQFDGKNSAPDDRVLVIGATNR 299 (428)
T ss_pred HHHCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCC---CCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCC
T ss_conf 532467077899999999871397089840256788636875---45445556557776540445788870799815888
Q ss_pred CCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCC-CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 100883331656423141000134788999999985488777-3211024544120379899999999987645532024
Q gi|254780545|r 296 PDVLDAALLRPGRFDRQITVPNPDIVGREHILMVHSRNVPLA-PNVILKTIARGTPGFSGADLRNLVNEAALMAARRNRR 374 (647)
Q Consensus 296 ~~~lD~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~~~~~~-~~~d~~~la~~t~g~sgAdi~~~~~eAa~~a~r~~~~ 374 (647)
T Consensus 300 P~e~Dea~~R--rf~kr~yiplPd~etr~~~~~~ll~~~~~~l~~~d~~~l~~~Tegysgsdi~~l~kea~~~p~r~~~~ 377 (428)
T KOG0740 300 PWELDEAARR--RFVKRLYIPLPDYETRSLLWKQLLKEQPNGLSDLDISLLAKVTEGYSGSDITALCKEAAMGPLRELGG 377 (428)
T ss_pred CHHHHHHHHH--HHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHCCC
T ss_conf 3677888888--71031553598878999999999976878741778999998861756221889987762384544012
Q ss_pred -------------CCCHHHHHHHHHHCC
Q ss_conf -------------210456899975013
Q gi|254780545|r 375 -------------LVTMQEFEDAKDKIL 389 (647)
Q Consensus 375 -------------~i~~~dl~~A~~rv~ 389 (647)
T Consensus 378 ~~~~~~~~~~~~r~i~~~df~~a~~~i~ 405 (428)
T KOG0740 378 TTDLEFIDADKIRPITYPDFKNAFKNIK 405 (428)
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHC
T ss_conf 0114422300258988626899887403