HHsearch alignment for GI: 254780545 and conserved domain: KOG0990

Probab=98.20  E-value=4.1e-05  Score=55.98  Aligned_cols=161  Identities=22%  Similarity=0.263  Sum_probs=99.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHH
Q ss_conf             11242256988985288999999999874335676642012333110037874258889999742469970205857886
Q gi|254780545|r  139 SGNVGSVTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFV  218 (647)
Q Consensus       139 ~~~~~~v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~  218 (647)
T Consensus        32 vekyrP~~l~dv~~~~ei~st~~~~----------~~~~-~lP-h~L~YgPPGtGktsti~a~a~~ly~~--~~~~~m~l   97 (360)
T KOG0990          32 VEKYRPPFLGIVIKQEPIWSTENRY----------SGMP-GLP-HLLFYGPPGTGKTSTILANARDFYSP--HPTTSMLL   97 (360)
T ss_pred             CCCCCCCHHHHHHCCCCHHHHHHHH----------CCCC-CCC-CCCCCCCCCCCCCCCHHHHHHHHCCC--CCCHHHHH
T ss_conf             6688982256673377212478886----------2688-897-53434899889987366656650589--98246999


Q ss_pred             HHHH----HCCHHHHH-HHHHHHHH-------HCCHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             4442----03324599-99999987-------378012063235641445578988626889889989985303235778
Q gi|254780545|r  219 ELFV----GVGASRVR-DMFEQAKN-------NSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEG  286 (647)
Q Consensus       219 ~~~~----g~g~~~vr-~lf~~a~~-------~~p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~  286 (647)
T Consensus        98 elnaSd~rgid~vr~qi~~fast~~~~~fst~~~fKlvILDEADaMT--~~------------AQnALRRviek~t~n~r  163 (360)
T KOG0990          98 ELNASDDRGIDPVRQQIHLFASTQQPTTYSTHAAFKLVILDEADAMT--RD------------AQNALRRVIEKYTANTR  163 (360)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCEEEEEECCHHHHH--HH------------HHHHHHHHHHHHCCCEE
T ss_conf             86436766886147888987764164000246761588733413766--98------------99999999987133237


Q ss_pred             EEEEEECCCCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHC
Q ss_conf             2999962981008833316564231410001347889999999854
Q gi|254780545|r  287 VILIAATNRPDVLDAALLRPGRFDRQITVPNPDIVGREHILMVHSR  332 (647)
Q Consensus       287 v~vi~aTn~~~~lD~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~~  332 (647)
T Consensus       164 F~ii~--n~~~ki~pa~qs--Rctrfrf~pl~-~~~~~~r~shi~e  204 (360)
T KOG0990         164 FATIS--NPPQKIHPAQQS--RCTRFRFAPLT-MAQQTERQSHIRE  204 (360)
T ss_pred             EEEEC--CCHHHCCCHHHC--CCCCCCCCCCC-HHHHHHHHHHHHH
T ss_conf             99861--676446814641--04457878887-5442467888871