HHsearch alignment for GI: 254780545 and conserved domain: KOG2227

Probab=98.08  E-value=0.00023  Score=50.64  Aligned_cols=180  Identities=22%  Similarity=0.222  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCC---CC--EECCC--------------HHHHH
Q ss_conf             9999999874335676642012333110037874258889999742469---97--02058--------------57886
Q gi|254780545|r  158 EDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEAN---VP--FFTIS--------------GSDFV  218 (647)
Q Consensus       158 ~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~---~~--f~~~~--------------~s~~~  218 (647)
T Consensus       157 ~e~~~v~~F~~~h-----le~~t~gSlYVsG~PGtgkt~~l~rvl~~~~~~~~~~~~v~inc~sl~~~~aiF~kI~~~~~  231 (529)
T KOG2227         157 LEMDIVREFFSLH-----LELNTSGSLYVSGQPGTGKTALLSRVLDSLSKSSKSPVTVYINCTSLTEASAIFKKIFSSLL  231 (529)
T ss_pred             HHHHHHHHHHHHH-----HHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             8899999999854-----31266764575179986548899999874034316651699851235425889999988898


Q ss_pred             HHHHHCCHH-HHHHHHHHH-HHHC-CHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf             444203324-599999999-8737-8012063235641445578988626889889989985303235778299996298
Q gi|254780545|r  219 ELFVGVGAS-RVRDMFEQA-KNNS-PCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNR  295 (647)
Q Consensus       219 ~~~~g~g~~-~vr~lf~~a-~~~~-p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~  295 (647)
T Consensus       232 q~~~s~~~~~~~~~~~~~h~~q~k~~~llVlDEmD~L~tr~-~~----------vLy~-lFewp~-lp~sr~iLiGiANs  298 (529)
T KOG2227         232 QDLVSPGTGMQHLEKFEKHTKQSKFMLLLVLDEMDHLITRS-QT----------VLYT-LFEWPK-LPNSRIILIGIANS  298 (529)
T ss_pred             HHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCC-CC----------EEEE-EHHCCC-CCCCEEEEEEEHHH
T ss_conf             87428950478999999987525633898721256776046-53----------1432-100136-77660566640013


Q ss_pred             CCCCCHHHCCC----CCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHCCCHH
Q ss_conf             10088333165----6423141000134788999999985488777321--102454412037989
Q gi|254780545|r  296 PDVLDAALLRP----GRFDRQITVPNPDIVGREHILMVHSRNVPLAPNV--ILKTIARGTPGFSGA  355 (647)
Q Consensus       296 ~~~lD~al~Rp----gRfd~~i~~~~P~~~~r~~i~~~~~~~~~~~~~~--d~~~la~~t~g~sgA  355 (647)
T Consensus       299 lDlTdR~LprL~~~~~~~P~~l~F~PYTk~qI~~Il~~rl~~~~t~~~~~~Aie~~ArKvaa~SGD  364 (529)
T KOG2227         299 LDLTDRFLPRLNLDLTIKPKLLVFPPYTKDQIVEILQQRLSEESTSIFLNAAIELCARKVAAPSGD  364 (529)
T ss_pred             HHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHH
T ss_conf             557777766654025788746655687889999999999740544333038999999986257612