HHsearch alignment for GI: 254780545 and conserved domain: PRK05342
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional.
Probab=99.58 E-value=4.2e-14 Score=121.06 Aligned_cols=145 Identities=28% Similarity=0.357 Sum_probs=97.5
Q ss_pred CCCCCCCCHHHHHH-HHHHHHHHHHHHHHHH-HHHHHHH--HHHHHCCC-CCCEEECCCCCHHHHHHHHHHHCCCCCCEE
Q ss_conf 00011242256988-9852889999999998-7433567--66420123-331100378742588899997424699702
Q gi|254780545|r 136 KLLSGNVGSVTFKD-VAGVDEAKEDLQEIVD-FLCDPQK--FKRLGGRI-PHGVLLVGPPGTGKTLLARAVAGEANVPFF 210 (647)
Q Consensus 136 k~~~~~~~~v~f~d-v~g~~~~k~~~~~~v~-~l~~~~~--~~~~g~~~-p~g~ll~GppGtGKTlla~a~a~e~~~~f~ 210 (647)
T Consensus 59 ~lp~P~eI~~~LD~yVIGQ~~AKk~lsVAvyNHykRi~~~~~~~~~vei~KsNILliGPTG~GKTlla~tLAk~l~vPF~ 138 (411)
T PRK05342 59 ELPTPKEIKAHLDQYVIGQERAKKVLSVAVYNHYKRLRQNGSKSDDVELQKSNILLIGPTGSGKTLLAQTLARILNVPFA 138 (411)
T ss_pred CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 69997999998621402848888999999999999986021335665213453899899997788999999998699989
Q ss_pred CCCHHHHHH-HHHHCC-HHHHHHHHHHHHH----HCCHHEEHHHHHHHHCCCCCCCCCCCHH-HHHHHHHHHHHHCCC
Q ss_conf 058578864-442033-2459999999987----3780120632356414455789886268-898899899853032
Q gi|254780545|r 211 TISGSDFVE-LFVGVG-ASRVRDMFEQAKN----NSPCIVFVDEIDAVGRHRGIGLGGGNDE-REQTLNQLLVEMDGF 281 (647)
Q Consensus 211 ~~~~s~~~~-~~~g~g-~~~vr~lf~~a~~----~~p~iifiDeida~~~~r~~~~~~~~~e-~~~~ln~ll~~mdg~ 281 (647)
T Consensus 139 iaDAT~lTEaGYVGeDVE~ii~~Llq~Ad~dve~Ae~GIV~IDEIDKIarks~~~s-~trDVSgEGVQqaLLkiiEGt 215 (411)
T PRK05342 139 IADATTLTEAGYVGEDVENILLKLLQAADYDVEKAQRGIVYIDEIDKIARKSENPS-ITRDVSGEGVQQALLKILEGT 215 (411)
T ss_pred EEEECEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCEEEEEEHHHHHHCCCCCC-CCCCCCCHHHHHHHHHHHCCC
T ss_conf 98612001267456079999999999828889988368288850234542478888-877765124899999987587