HHsearch alignment for GI: 254780545 and conserved domain: PRK05917

>PRK05917 DNA polymerase III subunit delta'; Validated.
Probab=98.27  E-value=3.7e-05  Score=56.31  Aligned_cols=116  Identities=19%  Similarity=0.277  Sum_probs=74.1

Q ss_pred             CCCCCCEEECCCCCHHHHHHHHHHHCCCCC---C-----EECCCHHHHHHHHH-HCC----HHHHHHHHHHHHH----HC
Q ss_conf             123331100378742588899997424699---7-----02058578864442-033----2459999999987----37
Q gi|254780545|r  178 GRIPHGVLLVGPPGTGKTLLARAVAGEANV---P-----FFTISGSDFVELFV-GVG----ASRVRDMFEQAKN----NS  240 (647)
Q Consensus       178 ~~~p~g~ll~GppGtGKTlla~a~a~e~~~---~-----f~~~~~s~~~~~~~-g~g----~~~vr~lf~~a~~----~~  240 (647)
T Consensus        16 ~Rl~HAyLf~Gp~G~GK~~~A~~~A~~LLc~~~p~~~~~i~~~~HPD~~~i~pe~k~~~~~Id~iR~l~~~i~~~p~~g~   95 (290)
T PRK05917         16 QKVPSAILLHGQDLSNLSQYAYELASLILLESSPEAQYKISQKIHPDIHEFFPEGKGRLHSIETPRAIKKQIWIHPYEAN   95 (290)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf             99660687689998659999999999985789961688987468998599615777887867899999999641864688


Q ss_pred             CHHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHC-CCCCC
Q ss_conf             8012063235641445578988626889889989985303235778299996298100883331-65642
Q gi|254780545|r  241 PCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDVLDAALL-RPGRF  309 (647)
Q Consensus       241 p~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~lD~al~-RpgRf  309 (647)
T Consensus        96 ~KV~IId~Ad~Mn--------------~~AaNALLKtLE--EPP~~tvfILit~~~~~lLpTI~SRCQ~I  149 (290)
T PRK05917         96 YKIYIIHEADRMT--------------LDAISAFLKVLE--DPPKHSVIILTSAKPQRLPPTIRSRSLSI  149 (290)
T ss_pred             CEEEEECCHHHHC--------------HHHHHHHHHHHC--CCCCCEEEEEEECCHHHCCHHHHHCCCEE
T ss_conf             2699975677638--------------999999999734--79878599998699254823776335116