HHsearch alignment for GI: 254780545 and conserved domain: PRK06645

>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.43  E-value=4.5e-12  Score=106.34  Aligned_cols=221  Identities=24%  Similarity=0.369  Sum_probs=141.0

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECC--
Q ss_conf             000011242256988985288999999999874335676642012333110037874258889999742469970205--
Q gi|254780545|r  135 AKLLSGNVGSVTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTI--  212 (647)
Q Consensus       135 Ak~~~~~~~~v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~--  212 (647)
T Consensus        12 a~KyRP~----~f~~liGQ~~~~~~l~n~i~-----------~~~~~~aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~   76 (507)
T PRK06645         12 ARKYRPS----NFAELQGQEVLVKVLSYTIL-----------NDRLAGGYLLTGIRGVGKTTSARIIAKAVNCSALITEN   76 (507)
T ss_pred             EECCCCC----CHHHHCCCHHHHHHHHHHHH-----------CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC
T ss_conf             3200799----76562393999999999997-----------39966347745879978899999999996799988889


Q ss_pred             -------CHH-----------HHHHHHH--HCCHHHHHHHHHHHHHHCC-----HHEEHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf             -------857-----------8864442--0332459999999987378-----01206323564144557898862688
Q gi|254780545|r  213 -------SGS-----------DFVELFV--GVGASRVRDMFEQAKNNSP-----CIVFVDEIDAVGRHRGIGLGGGNDER  267 (647)
Q Consensus       213 -------~~s-----------~~~~~~~--g~g~~~vr~lf~~a~~~~p-----~iifiDeida~~~~r~~~~~~~~~e~  267 (647)
T Consensus        77 ~~~~~c~~c~~c~~i~~~~~~dv~EiDaas~~gv~~ir~l~~~~~-~~p~~~~~kv~iidE~hmls--------------  141 (507)
T PRK06645         77 TTIKTCEKCTNCISFNNHNHPDIIEIDAASKTSVDDIRRIIESAE-YKPLQGKHKIFIIDEVHMLS--------------  141 (507)
T ss_pred             CCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCC-CCCCCCCEEEEEECCHHHCC--------------
T ss_conf             988888887678998658999859963788888899999986355-17876743589952142248--------------


Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHC-CCCCCCCEEEECHHHHHHHHH-HHHHHHCCCCCCCCCCHHHH
Q ss_conf             9889989985303235778299996298100883331-656423141000134788999-99998548877732110245
Q gi|254780545|r  268 EQTLNQLLVEMDGFESSEGVILIAATNRPDVLDAALL-RPGRFDRQITVPNPDIVGREH-ILMVHSRNVPLAPNVILKTI  345 (647)
Q Consensus       268 ~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~lD~al~-RpgRfd~~i~~~~P~~~~r~~-i~~~~~~~~~~~~~~d~~~l  345 (647)
T Consensus       142 ~~a~nallktlE--epp~~~~Fi~atte~~kip~ti~srcq~f~~~-~i~~~~i~~~l~~i~~--~E~~~~~~~-al~~i  215 (507)
T PRK06645        142 KGAFNALLKTLE--EPPPHIIFIFATTEVQKIPATIISRCQRYDLR-RLSFEEIFKLLEYITK--QENLKADIE-ALRII  215 (507)
T ss_pred             HHHHHHHHHHHH--CCCCCEEEEEECCCHHHCCHHHHHHCEEEEEE-CCCHHHHHHHHHHHHH--HCCCCCCHH-HHHHH
T ss_conf             999999999742--78644389997485364837888543278754-5997999999999999--768777789-99999


Q ss_pred             HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             44120379899999999987645532024210456899975013686556766
Q gi|254780545|r  346 ARGTPGFSGADLRNLVNEAALMAARRNRRLVTMQEFEDAKDKILMGAERRSTA  398 (647)
Q Consensus       346 a~~t~g~sgAdi~~~~~eAa~~a~r~~~~~i~~~dl~~A~~rv~~G~ek~~~~  398 (647)
T Consensus       216 a~~a~G-s~RDalslldqai~~~~-~~~~~I~~~~V~~-----MLGl~Drs~l  261 (507)
T PRK06645        216 AYKSEG-SARDAVSILDQAASMSA-KSDNIISPQVINQ-----MLGLVDLSVI  261 (507)
T ss_pred             HHHCCC-CHHHHHHHHHHHHHHHC-CCCCCCCHHHHHH-----HHCCCCHHHH
T ss_conf             985599-86789999999999754-8987026999999-----8389985679