HHsearch alignment for GI: 254780545 and conserved domain: PRK06647
>PRK06647 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.40 E-value=5.8e-12 Score=105.58 Aligned_cols=203 Identities=24% Similarity=0.302 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEE-------CC-----
Q ss_conf 569889852889999999998743356766420123331100378742588899997424699702-------05-----
Q gi|254780545|r 145 VTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFF-------TI----- 212 (647)
Q Consensus 145 v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~-------~~----- 212 (647)
T Consensus 13 ~~F~dvvGQe~vv~~L~nai~-----------~~rl~HAyLFsGprG~GKTt~ArilAk~LnC~~~~~~~PCg~C~sC~~ 81 (560)
T PRK06647 13 RDFNSLEGQDFVVETLKHSIE-----------KNKIANAYIFSGPRGVGKTSSARAFARCLNCVNGPTIMPCGECFSCKS 81 (560)
T ss_pred CCHHHHCCCHHHHHHHHHHHH-----------CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 865440394999999999997-----------499774366328998789999999999965999999888878878888
Q ss_pred ----CHHHHHHHHHH--CCHHHHHHHHHHHHHHCC-----HHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf ----85788644420--332459999999987378-----0120632356414455789886268898899899853032
Q gi|254780545|r 213 ----SGSDFVELFVG--VGASRVRDMFEQAKNNSP-----CIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGF 281 (647)
Q Consensus 213 ----~~s~~~~~~~g--~g~~~vr~lf~~a~~~~p-----~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~ 281 (647)
T Consensus 82 i~~g~~~DviEidaasn~~VddIR~l~e~v~-~~P~~~~yKV~IIDEahmLt--------------~~A~NALLKtLE-- 144 (560)
T PRK06647 82 IDNDSSLDVIEIDGASNTSVQDVRQIKEEIM-FPPASSRYRVYIIDEVHMLS--------------NSAFNALLKTIE-- 144 (560)
T ss_pred HHCCCCCCEEEECCCCCCCHHHHHHHHHHHC-CCCCCCCEEEEEECCHHHCC--------------HHHHHHHHHHHH--
T ss_conf 7459998757643645488899999999863-28766870699964656559--------------999999999863--
Q ss_pred CCCCCEEEEEECCCCCCCCHHHC-CCCCCCCEEEECHHHHHHHHHHHHHHH--CCCCCCCCCCHHHHHHHHHCCCHHHHH
Q ss_conf 35778299996298100883331-656423141000134788999999985--488777321102454412037989999
Q gi|254780545|r 282 ESSEGVILIAATNRPDVLDAALL-RPGRFDRQITVPNPDIVGREHILMVHS--RNVPLAPNVILKTIARGTPGFSGADLR 358 (647)
Q Consensus 282 ~~~~~v~vi~aTn~~~~lD~al~-RpgRfd~~i~~~~P~~~~r~~i~~~~~--~~~~~~~~~d~~~la~~t~g~sgAdi~ 358 (647)
T Consensus 145 EPP~~~~FILaTte~~KI~~TI~SRCQ~f~Fk-~i~~~~I~~~---L~~I~~~E~i~~e~~-AL~lIa~~a~G-s~RDal 218 (560)
T PRK06647 145 EPPPYIVFIFATTEVHKLPATIKSRCQHFNFR-LLSLEKIYEM---LKKVCLEDDIKYEDE-ALKWIAYKSGG-SVRDAY 218 (560)
T ss_pred CCCCCEEEEEECCCHHHCHHHHHHHHEEEECC-CCCHHHHHHH---HHHHHHHCCCCCCHH-HHHHHHHHCCC-CHHHHH
T ss_conf 48875599997799476848999651041055-5999999999---999998679887999-99999997789-588899
Q ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 999998764553202421045689997
Q gi|254780545|r 359 NLVNEAALMAARRNRRLVTMQEFEDAK 385 (647)
Q Consensus 359 ~~~~eAa~~a~r~~~~~i~~~dl~~A~ 385 (647)
T Consensus 219 slldq~i~~----~~~~i~~~~v~~~l 241 (560)
T PRK06647 219 TLFDQIVSF----SNSDITLEQIRSKM 241 (560)
T ss_pred HHHHHHHHC----CCCCCCHHHHHHHH
T ss_conf 999999960----79977899999986