HHsearch alignment for GI: 254780545 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.43 E-value=1.4e-12 Score=110.00 Aligned_cols=205 Identities=28% Similarity=0.424 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEE--------------
Q ss_conf 569889852889999999998743356766420123331100378742588899997424699702--------------
Q gi|254780545|r 145 VTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFF-------------- 210 (647)
Q Consensus 145 v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~-------------- 210 (647)
T Consensus 13 ~~F~dvvGQ~~v~~~L~nai~-----------~~ri~HAyLF~GprGtGKts~Ari~AkaLnC~~~~~~~pC~~C~~C~~ 81 (563)
T PRK06674 13 QKFEDVVGQEHVTKTLQNALL-----------QEKVSHAYLFSGPRGTGKTSIAKVFAKAVNCEHAPVAEPCNECPSCLG 81 (563)
T ss_pred CCHHHHCCHHHHHHHHHHHHH-----------CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 976552480999999999998-----------499650343128998689999999999857999999887766878999
Q ss_pred --CCCHHHHHHHHHH--CCHHHHHHHHHHHHHHCC-----HHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf --0585788644420--332459999999987378-----0120632356414455789886268898899899853032
Q gi|254780545|r 211 --TISGSDFVELFVG--VGASRVRDMFEQAKNNSP-----CIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGF 281 (647)
Q Consensus 211 --~~~~s~~~~~~~g--~g~~~vr~lf~~a~~~~p-----~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~ 281 (647)
T Consensus 82 i~~g~~~DviEiDaasn~gVd~IR~i~~~v~-~~P~~~~yKV~IIDeah~Lt--------------~~A~NALLKtLE-- 144 (563)
T PRK06674 82 ITNGSISDVLEIDAASNNGVDEIRDIRDKVK-FAPSAVEYKVYIIDEVHMLS--------------IGAFNALLKTLE-- 144 (563)
T ss_pred HHCCCCCCEEEECCCCCCCHHHHHHHHHHHC-CCCCCCCEEEEEEECHHHCC--------------HHHHHHHHHHHH--
T ss_conf 8558998779852555578799999999826-48867873799985456379--------------999999999863--
Q ss_pred CCCCCEEEEEECCCCCCCCHHHC-CCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHH
Q ss_conf 35778299996298100883331-65642314100013478899999998548877732110245441203798999999
Q gi|254780545|r 282 ESSEGVILIAATNRPDVLDAALL-RPGRFDRQITVPNPDIVGREHILMVHSRNVPLAPNVILKTIARGTPGFSGADLRNL 360 (647)
Q Consensus 282 ~~~~~v~vi~aTn~~~~lD~al~-RpgRfd~~i~~~~P~~~~r~~i~~~~~~~~~~~~~~d~~~la~~t~g~sgAdi~~~ 360 (647)
T Consensus 145 EPP~~viFILaTtep~ki~~TI~SRCQrf~F~-ri~~~~i~~rL~~I~-~~E~i~~~~~-aL~~Ia~~a~G-smRDAlsi 220 (563)
T PRK06674 145 EPPGHVIFILATTEPHKIPPTIISRCQRFDFR-RISVNDIVERLSTVV-TNEGTQVEDE-ALQIIARAADG-GMRDALSL 220 (563)
T ss_pred CCCCCEEEEEECCCHHHCCHHHHHHHEEEECC-CCCHHHHHHHHHHHH-HHCCCCCCHH-HHHHHHHHCCC-CHHHHHHH
T ss_conf 88756499996599475847887331031278-899999999999999-9849998788-99999997699-78899999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 9998764553202421045689997
Q gi|254780545|r 361 VNEAALMAARRNRRLVTMQEFEDAK 385 (647)
Q Consensus 361 ~~eAa~~a~r~~~~~i~~~dl~~A~ 385 (647)
T Consensus 221 LdQ~~s~----~~~~i~~~~v~~~l 241 (563)
T PRK06674 221 LDQAISF----SDERVTTEDVLAVT 241 (563)
T ss_pred HHHHHHH----CCCCCCHHHHHHHH
T ss_conf 9999971----59976899999986