HHsearch alignment for GI: 254780545 and conserved domain: PRK06921
>PRK06921 hypothetical protein; Provisional.
Probab=98.30 E-value=6.6e-06 Score=61.73 Aligned_cols=102 Identities=18% Similarity=0.279 Sum_probs=58.7
Q ss_pred CCCEEECCCCCHHHHHHHHHHHCCC----CCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHH--HHHHC
Q ss_conf 3311003787425888999974246----99702058578864442033245999999998737801206323--56414
Q gi|254780545|r 181 PHGVLLVGPPGTGKTLLARAVAGEA----NVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEI--DAVGR 254 (647)
Q Consensus 181 p~g~ll~GppGtGKTlla~a~a~e~----~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~~p~iifiDei--da~~~ 254 (647)
T Consensus 116 ~~~l~f~G~~G~GKThLa~aIa~~Ll~~~~~~Vly~~~~~~~~~lk~~-~~~~~~~l~~~-~~~d-lLIIDDLfk~~~G~ 192 (265)
T PRK06921 116 KNSIALLGQPGSGKTHLLTAAANELMRKKGVPVLYFPFVEGFGDLKDD-FDLLEAKLNRM-KKVE-VLFIDDLFKPVNGK 192 (265)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHH-HHHHHHHHHHH-HCCC-EEEEECCCCCCCCC
T ss_conf 662799728989889999999999999629719998879999999988-88899999986-3299-99982212234798
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf 45578988626889889989985303235778299996298
Q gi|254780545|r 255 HRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNR 295 (647)
Q Consensus 255 ~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~ 295 (647)
T Consensus 193 e~~------te---~~~~~lf~iIN~-Ry~~~kptIiSSNl 223 (265)
T PRK06921 193 PRA------TE---WQIEQTYSVVNY-RYLNHKPILISSEL 223 (265)
T ss_pred CCC------CH---HHHHHHHHHHHH-HHHCCCCEEEECCC
T ss_conf 789------88---999999999999-99769998998689