HHsearch alignment for GI: 254780545 and conserved domain: PRK07764
>PRK07764 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.27 E-value=1.3e-10 Score=95.72 Aligned_cols=188 Identities=29% Similarity=0.413 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEE-------------C
Q ss_conf 569889852889999999998743356766420123331100378742588899997424699702-------------0
Q gi|254780545|r 145 VTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPFF-------------T 211 (647)
Q Consensus 145 v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~-------------~ 211 (647)
T Consensus 12 ~~F~eviGQe~v~~~L~~Ai~-----------~gri~HAYLFsGprG~GKTt~ARilAkaLNC~~~~~~~PCg~C~sC~~ 80 (775)
T PRK07764 12 ATFAEVVGQEHVTEPLSTALD-----------SGRINHAYLFSGPRGCGKTSSARILARSLNCAQGPTSTPCGVCDSCVA 80 (775)
T ss_pred CCHHHHCCCHHHHHHHHHHHH-----------CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 876662285999999999998-----------199763376237888788899999999966899999898888763788
Q ss_pred CC-HH----HHHHHHH--HCCHHHHHHHHHHHHHHCCH-----HEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 58-57----8864442--03324599999999873780-----1206323564144557898862688988998998530
Q gi|254780545|r 212 IS-GS----DFVELFV--GVGASRVRDMFEQAKNNSPC-----IVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMD 279 (647)
Q Consensus 212 ~~-~s----~~~~~~~--g~g~~~vr~lf~~a~~~~p~-----iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~md 279 (647)
T Consensus 81 i~~g~~~~~DviEiDAAS~~gVddiReL~e~~-~y~P~~~ryKVyIIDEaHmls--------------~~afNALLKtLE 145 (775)
T PRK07764 81 LAPGGPGSLDVVEIDAASHGGVDDARELRERA-FFAPAQSRYRIFIIDEAHMVT--------------TAGFNALLKIVE 145 (775)
T ss_pred HHCCCCCCCCEEEECCCCCCCHHHHHHHHHHC-CCCCCCCCEEEEEEECHHHHC--------------HHHHHHHHHHHC
T ss_conf 86389888866873156556889999999854-768767863599985354407--------------999999988622
Q ss_pred CCCCCCCEEEEEECCCCCCCCHHHC-CCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHH
Q ss_conf 3235778299996298100883331-656423141000134788999999985488777321102454412037989999
Q gi|254780545|r 280 GFESSEGVILIAATNRPDVLDAALL-RPGRFDRQITVPNPDIVGREHILMVHSRNVPLAPNVILKTIARGTPGFSGADLR 358 (647)
Q Consensus 280 g~~~~~~v~vi~aTn~~~~lD~al~-RpgRfd~~i~~~~P~~~~r~~i~~~~~~~~~~~~~~d~~~la~~t~g~sgAdi~ 358 (647)
T Consensus 146 --EPP~hvvFIlaTTep~kip~TI~SRcq~f~Fr~-i~~~~~~~~l~~i-~~~E~i~~~~~-al~li~r~~-~Gs~RDal 219 (775)
T PRK07764 146 --EPPEHLIFIFATTEPEKVIGTIRSRTHHYPFRL-VPPGTMRPYLERI-CAQEGVVVDDA-VLPLVIRAG-GGSPRDTL 219 (775)
T ss_pred --CCCCCEEEEEECCCHHHCCHHHHHHCCCCCCCC-CCHHHHHHHHHHH-HHHCCCCCCHH-HHHHHHHHC-CCCHHHHH
T ss_conf --786462799954873547167764102345266-9999999999999-99839987989-999999982-89667689
Q ss_pred HHHHHH
Q ss_conf 999998
Q gi|254780545|r 359 NLVNEA 364 (647)
Q Consensus 359 ~~~~eA 364 (647)
T Consensus 220 S~ldQl 225 (775)
T PRK07764 220 SVLDQL 225 (775)
T ss_pred HHHHHH
T ss_conf 999999