HHsearch alignment for GI: 254780545 and conserved domain: PRK08181

Probab=98.29  E-value=1.8e-06  Score=65.86  Aligned_cols=100  Identities=22%  Similarity=0.343  Sum_probs=61.0

Q ss_pred             CCCEEECCCCCHHHHHHHHHHHCCC---CCCEECCCHHHHHHHHHHC-CHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCC
Q ss_conf             3311003787425888999974246---9970205857886444203-32459999999987378012063235641445
Q gi|254780545|r  181 PHGVLLVGPPGTGKTLLARAVAGEA---NVPFFTISGSDFVELFVGV-GASRVRDMFEQAKNNSPCIVFVDEIDAVGRHR  256 (647)
Q Consensus       181 p~g~ll~GppGtGKTlla~a~a~e~---~~~f~~~~~s~~~~~~~g~-g~~~vr~lf~~a~~~~p~iifiDeida~~~~r  256 (647)
T Consensus       106 ~~Nvil~Gp~GtGKThLA~Alg~~A~~~G~~V~f~~~~~L~~~L~~a~~~~~~~~~~~~--l~~~dLLIiDe~G~~~~--  181 (269)
T PRK08181        106 GANLLLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLVQKLQVARRELQLESAIAK--LDKFDLLILDDLAYVTK--  181 (269)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHH--HHCCCEEEEHHCCCCCC--
T ss_conf             87089989999878899999999999879939997899999999997755839999999--74446012201056679--


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
Q ss_conf             5789886268898899899853032357782999962981
Q gi|254780545|r  257 GIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRP  296 (647)
Q Consensus       257 ~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~  296 (647)
T Consensus       182 -------~~~~~~~lf~lI~~R---ye~~-S~II-TSn~~  209 (269)
T PRK08181        182 -------DQAETSVLFELISAR---YERR-SILI-TANQP  209 (269)
T ss_pred             -------CHHHHHHHHHHHHHH---HCCC-CEEE-ECCCC
T ss_conf             -------989999999999998---5788-8899-88999